DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018107
GeneRps28
Synonyms
Desc.ribosomal protein S28
LocusNM_016844 chr17:33959982-33961443(-)
DB links


Entrez 54127
MGI 1859516
Ensembl ENSMUSG00000067288
Vega OTTMUSG00000037209
Featureprotein-coding
GO(BP)
GO(MF)
  •   1 Terms
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018636
(v2.0)
Rps28NM_01684454127
3755.1748.508584.3892290.9911012.41622.9647.85167.7319771.121911.24
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018107
(v1.0)
Rps2854127
MGA0.99889
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018636
(v2.0)
Rps2854127
610/478-0.1607441/478-0.2319121/4781.5948334/4780.810916/478-2.7681147/478-2.2888
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018636
(v2.0)
Rps2854127
257/199-0.1431181/199-0.2516108/1992.6472315/1991.98038/199-2.438848/199-2.6134
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018636
(v2.0)
Rps2854127
61.556610857
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018636
(v2.0)
Rps2854127
30.41617640.02
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018107
(v1.0)
Rps28NM_01684454127
50.411858.4493216.824703.564466.699
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018107
(v1.0)
Rps28NM_01684454127
00.2596391.413920.7587452.06828
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018107
(v1.0)
Rps28NM_01684454127
52.71011373.363.7695
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018107
(v1.0)
Rps28NM_01684454127
51.450357.862450.5579
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018107
(v1.0)
Rps28NM_01684454127
0.26340
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018107
(v1.0)
Rps28NM_01684454127
52.74071354.4955.4502
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018107
(v1.0)
Rps28NM_01684454127
200.745679.319536.191
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018107
(v1.0)
Rps28NM_01684454127
0.7506661.67826
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018107
(v1.0)
Rps28NM_01684454127
13.7509388.029
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018107
(v1.0)
Rps28NM_01684454127
18.232617.1046
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018107
(v1.0)
10558H3099D03-3Mm.3458Rps2854127
Rps283.79323.77313.98084.58775.11175.01465.0977
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018107
(v1.0)
1451101_a_atMm.393918Rps2854127
1464.1869.152750.2759505.1756150.975
0018107
(v1.0)
1423763_x_atMm.393918Rps2854127
1464.1840.452614.22510579.5757154.675
0018107
(v1.0)
1454778_x_atMm.393918Rps2854127
1317.375824.32525.0510610.16927.725
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018107
(v1.0)
A_51_P335671Rps28AK00291954127
11P0.9990.995P
0018107
(v1.0)
A_52_P232909Rps28NM_01684454127
11P1.290.238P
0018107
(v1.0)
A_52_P55271Rps28NM_01684454127
11P1.0650.642P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018107
(v1.0)
Rps2854127
100200