DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018108
GeneRps29
SynonymsS29 ribosomal protein
Desc.ribosomal protein S29
LocusNM_009093 chr12:70258709-70260173(-)
DB links


Entrez 20090
MGI 107681
Ensembl ENSMUSG00000034892
Vega OTTMUSG00000023728
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018637
(v2.0)
Rps29NM_00909320090
3256.7192.48411.7676805.5691683.034857.16380.7959.244163229.225771.66
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018108
(v1.0)
Rps2920090
Major ZGA0.98893
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018637
(v2.0)
Rps2920090
517/373-0.0417427/3730.0787106/3731.7533262/3730.817526/373-1.7464175/373-1.6826
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018637
(v2.0)
Rps2920090
201/1220.2059156/1220.2367100/1223.1917246/1222.31953/122-2.921428/122-2.6585
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018637
(v2.0)
Rps2920090
58.220513244.11
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018637
(v2.0)
Rps2920090
15.2718617.76
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018108
(v1.0)
Rps29NM_00909320090
200.1898.14297601.7291170.93272.433
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018108
(v1.0)
Rps29NM_00909320090
1.3277709.3256116.13052.1799
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018108
(v1.0)
Rps29NM_00909320090
209.3161191.018.88416
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018108
(v1.0)
Rps29NM_00909320090
204.3148.061216.85523
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018108
(v1.0)
Rps29NM_00909320090
00.184172
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018108
(v1.0)
Rps29NM_00909320090
209.4381174.77.51859
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018108
(v1.0)
Rps29NM_00909320090
557.1071130.582226.62
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018108
(v1.0)
Rps29NM_00909320090
15.956528.4512
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018108
(v1.0)
Rps29NM_00909320090
20.64751362.33
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018108
(v1.0)
Rps29NM_00909320090
7.807145.75467
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018108
(v1.0)
11890H3126F06-3Mm.154915Rps2920090
U034028NAP093277-001TC918901,TC918900,TC918899,TC918898,TC918897,TC918894,TC918891,TC918890,TC918889,TC918888,TC9188863.80983.27263.96795.09415.18425.22935.1509
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018108
(v1.0)
A_52_P158090Rps29NM_00909320090
11P0.6530.147P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018108
(v1.0)
Rps2920090
2111811