DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018113
GeneRps5
SynonymsS5 ribosomal protein
Desc.ribosomal protein S5
LocusNM_009095 chr7:13507660-13512035(+)
DB links


Entrez 20103
MGI 1097682
Ensembl ENSMUSG00000012848
Vega OTTMUSG00000023212
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018642
(v2.0)
Rps5NM_00909520103
1352.39122.57213.0349573.9061668.879258.92699.2726.337651552.1911036.4
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018113
(v1.0)
Rps520103
Major ZGA0.9925
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018642
(v2.0)
Rps520103
594/421-0.0161320/421-0.5105151/4212.0903398/4211.245347/421-1.0891476/421-0.421
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018642
(v2.0)
Rps520103
260/1720.0828137/172-0.4414142/1723.2363376/1722.442518/172-1.1551126/172-1.0395
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018642
(v2.0)
Rps520103
52.970713140.44
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018642
(v2.0)
Rps520103
13.03328714.98
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018113
(v1.0)
Rps5NM_00909520103
127.4188.99056427.2741158.73497.731
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018113
(v1.0)
Rps5NM_00909520103
196.64113.3281751.931944.521074.72
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018113
(v1.0)
Rps5NM_00909520103
133.227494.5819.8089
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018113
(v1.0)
Rps5NM_00909520103
130.0438.900294.7039
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018113
(v1.0)
Rps5NM_00909520103
82.50458.31609
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018113
(v1.0)
Rps5NM_00909520103
133.304487.8075.15908
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018113
(v1.0)
Rps5NM_00909520103
395.5891118.81074.96
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018113
(v1.0)
Rps5NM_00909520103
1799.461664.78
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018113
(v1.0)
Rps5NM_00909520103
15.1619365.61
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018113
(v1.0)
Rps5NM_00909520103
12.074511.8573
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018113
(v1.0)
11330H3112G04-3Rps520103
U007680NAP001324-001Rps;Rps5;Znf8;TC824246,TC824238,TC824237P97461U,F,22.79812.99833.16913.21993.20133.41523.4917
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018113
(v1.0)
1416054_atMm.5291Rps5NM_009095.220103
2540.85254.52301.3759251.15830.475
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018113
(v1.0)
A_51_P174335Rps5NM_00909520103
11P1.1610.417P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018113
(v1.0)
Rps520103
23.513.55.51