DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018115
GeneRps6ka1
SynonymsRsk1
Desc.ribosomal protein S6 kinase polypeptide 1
LocusNM_009097 chr4:133403206-133443714(-)
DB links


Entrez 20111
MGI 104558
Ensembl ENSMUSG00000003644
Vega OTTMUSG00000009632
Featureprotein-coding
GO(BP)
  •   8 Terms
      protein phosphorylation (GO:0006468)
      intracellular protein kinase cascade (GO:0007243)
      phosphorylation (GO:0016310)
      negative regulation of apoptotic process (GO:0043066)
      negative regulation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0043154)
      positive regulation of transcription, DNA-dependent (GO:0045893)
      positive regulation of transcription from RNA polymerase II promoter (GO:0045944)
      positive regulation of hepatic stellate cell activation (GO:2000491)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018644
(v2.0)
Rps6ka1NM_001285505,NM_001285506,NM_00909720111
25.175513.75914.956215.982415.005235.19045.6757820.626715.860334.2338
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018115
(v1.0)
Rps6ka120111
Major ZGA0.82998
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018644
(v2.0)
Rps6ka120111
775/5370.0164447/537-0.38159/5371.822427/5370.9972136/5370.0759973/5370.2577
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018644
(v2.0)
Rps6ka120111
390/2150.3449221/215-0.0761152/2153.0311401/2152.217476/2150.5487523/2150.6806
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018644
(v2.0)
Rps6ka120111
67.851112853.01
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018644
(v2.0)
Rps6ka120111
7.30996511.25
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018115
(v1.0)
Rps6ka1NM_00909720111
13.59469.8762411.30219.858833.80725
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018115
(v1.0)
Rps6ka1NM_00909720111
335.007207.068297.099183.38776.7848
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018115
(v1.0)
Rps6ka1NM_00909720111
14.21448.4305710.7752
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018115
(v1.0)
Rps6ka1NM_00909720111
13.87469.7770714.7274
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018115
(v1.0)
Rps6ka1NM_00909720111
177.656496.593
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018115
(v1.0)
Rps6ka1NM_00909720111
14.22268.315116.1525
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018115
(v1.0)
Rps6ka1NM_00909720111
10.46399.5190910.4684
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018115
(v1.0)
Rps6ka1NM_00909720111
146.501180.417
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018115
(v1.0)
Rps6ka1NM_00909720111
1.852171.5779
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018115
(v1.0)
Rps6ka1NM_00909720111
2.962292.89118
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018115
(v1.0)
5537H3002D07-3Mm.29910Rps6ka120111
U025627NAP015367-001Rps6ka1;TC909410,TC909409P186532.73692.97372.92652.89242.71633.13853.2065
0018115
(v1.0)
7335H3046D09-3Rps6ka120111
U025627NAP015367-001Rps6ka1;TC909410,TC909409P186533.40683.35743.18873.37613.73793.81774.0971
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018115
(v1.0)
1416896_atMm.301827Rps6ka1NM_009097.420111
142.350131.475240.875438.825
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018115
(v1.0)
A_51_P150044Rps6ka1NM_00909720111
11P0.7570.219P
0018115
(v1.0)
A_52_P463556Rps6ka1BC04907620111
11P0.9810.88P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018115
(v1.0)
Rps6ka120111
060060