DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018126
GeneRps8
Synonyms
Desc.ribosomal protein S8
LocusNM_009098 chr4:116826441-116828737(-)
DB links


Entrez 20116
MGI 98166
Ensembl ENSMUSG00000047675
Vega OTTMUSG00000009917
Featureprotein-coding
GO(BP)
  •   2 Terms
      maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) (GO:0000462)
      translational elongation (GO:0006414)
GO(MF)
  •   1 Terms
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018655
(v2.0)
Rps8NM_00909820116
1655.08261.1744.4933880.2922512.7412247.6679.28348.16452592.6414687.6
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018126
(v1.0)
Rps820116
Major ZGA0.96756
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018655
(v2.0)
Rps820116
661/3890.2515331/389-0.348181/3891.3107266/3890.77918/389-3.3913136/389-2.1032
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018655
(v2.0)
Rps820116
298/1290.6909138/129-0.018872/1292.65242/1292.2173/129-2.999339/129-2.2813
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018655
(v2.0)
Rps820116
82.114412665.17
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018655
(v2.0)
Rps820116
22.97196336.46
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018126
(v1.0)
Rps8NM_00909820116
271.5230.9225655.7061750.66483.241
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018126
(v1.0)
Rps8NM_00909820116
0.4945570.0369124.709777.961222.42402
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018126
(v1.0)
Rps8NM_00909820116
283.899605.2833.7371
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018126
(v1.0)
Rps8NM_00909820116
277.11330.61235.6879
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018126
(v1.0)
Rps8NM_00909820116
0.03752130.143625
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018126
(v1.0)
Rps8NM_00909820116
284.064596.9939.1413
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018126
(v1.0)
Rps8NM_00909820116
607.0821690.331800.45
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018126
(v1.0)
Rps8NM_00909820116
7.874736.77356
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018126
(v1.0)
Rps8NM_00909820116
46.1745577.458
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018126
(v1.0)
Rps8NM_00909820116
2.921251.50728
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018126
(v1.0)
1319C0199A07-3Mm.3381Rps820116
3.20062.6993.09072.94432.68392.68942.6415
0018126
(v1.0)
17958L0037C11-3Mm.3381Rps820116
U025427NAP097265-001TC841161,TC841155,TC841147Q9D823U,F,23.99663.71884.07635.03274.86595.26235.088
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018126
(v1.0)
1436760_a_atMm.485034~Mm.315904~Mm.338718Gm15501~Gm14438~Rps8~~NM_009098.2100040298
100043763
20116
679.475491.5749.63403.652373.4
0018126
(v1.0)
1455319_x_atMm.485034~Mm.315904~Mm.338718Gm15501~Gm14438~Rps8~~NM_009098.2100040298
100043763
20116
933.45308.31333.2755035.6753982.05
0018126
(v1.0)
1437610_x_atMm.485034~Mm.315904~Mm.338718Gm15501~Gm14438~Rps8~~NM_009098.2100040298
100043763
20116
1414435.2252014.257366.4255871.325
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018126
(v1.0)
A_51_P243684Rps8NM_00909820116
11P0.3440.0594P
0018126
(v1.0)
A_52_P189550Rps8NM_00909820116
11P0.340.0587P
0018126
(v1.0)
A_52_P284672Rps8NM_00909820116
11P0.1330.0323P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018126
(v1.0)
Rps820116
88017110