DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018139
GeneRragc
SynonymsGtr2
TIB929
YGR163W
Desc.Ras-related GTP binding C
LocusNM_017475 chr4:123594676-123614240(+)
DB links


Entrez 54170
MGI 1858751
Ensembl ENSMUSG00000028646
Vega OTTMUSG00000008994
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018669
(v2.0)
RragcNM_01747554170
65.6095376.675362.069146.56938.996812.769638.0345280.76253.507515.4862
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018139
(v1.0)
Rragc54170
Maternal RNA0.94493
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018669
(v2.0)
Rragc54170
679/3820.3163435/3820.0711285/3823.1384700/3822.19774/382-4.2134106/382-2.4322
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018669
(v2.0)
Rragc54170
403/1830.6234226/1830.1873271/1834.0802652/1833.14681/183-4.490456/183-2.277
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018669
(v2.0)
Rragc54170
49.727510149.24
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018669
(v2.0)
Rragc54170
13.44726321.34
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018139
(v1.0)
RragcNM_01747554170
391.546250.373109.1127.055626.6565
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018139
(v1.0)
RragcNM_01747554170
421.266231.792109.91527.756625.6346
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018139
(v1.0)
RragcNM_01747554170
409.39723.9941273.162
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018139
(v1.0)
RragcNM_01747554170
399.612247.859207.678
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018139
(v1.0)
RragcNM_01747554170
235.395225.748
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018139
(v1.0)
RragcNM_01747554170
409.63523.6654227.774
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018139
(v1.0)
RragcNM_01747554170
101.01926.123337.1468
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018139
(v1.0)
RragcNM_01747554170
27.456641.2512
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018139
(v1.0)
RragcNM_01747554170
148.17549.7837
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018139
(v1.0)
RragcNM_01747554170
194.713216.396
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018139
(v1.0)
7755H3053E03-3Mm.28746Gtr254170
U004780NAP009586-001Gtr2;TC892559,TC860350Q99K70U,F,24.37124.27453.63253.5913.18933.16533.0777
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018139
(v1.0)
1415749_a_atMm.220922RragcNM_017475.254170
2387.954937.9751932186.425402.45
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018139
(v1.0)
A_51_P346826RragcNM_01747554170
11P0.8070.277P
0018139
(v1.0)
A_52_P202725RragcNM_01747554170
11P0.3930.0678P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018139
(v1.0)
Rragc54170
32.5156.52