DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018143
GeneRrbp1
SynonymsES/130
mRRp0
mRRp1.8
mRRp10
mRRp15a
mRRp15b
mRRp16.8
mRRp2
mRRp41
mRRp47
mRRp5.4
p180
Desc.ribosome binding protein 1
LocusNM_024281 chr2:143773131-143836999(-)
NM_133626 chr2:143811600-143836999(-)
DB links


Entrez 81910
MGI 1932395
Ensembl ENSMUSG00000027422
Vega OTTMUSG00000003227
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018673
(v2.0)
Rrbp1NM_024281,NM_13362681910
80.07035.955897.4551122.458129.503633.763124.54378.6513126.596935.2646
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018143
(v1.0)
Rrbp181910
MGA0.97334
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018673
(v2.0)
Rrbp181910
854/5030.2504462/503-0.2384280/5032.7267589/5031.554278/503-0.6247555/503-0.4564
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018673
(v2.0)
Rrbp181910
484/1790.9184231/1790.2504266/1794.0833528/1792.874517/179-1.2893143/179-0.9161
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018673
(v2.0)
Rrbp181910
56.362413342.38
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018673
(v2.0)
Rrbp181910
5.7564678.59
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018143
(v1.0)
Rrbp1NM_024281,NM_13362681910
6.192085.1727416.655520.430317.24
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018143
(v1.0)
Rrbp1NM_024281,NM_13362681910
69.375191.8877142.575179.621292.603
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018143
(v1.0)
Rrbp1NM_024281,NM_13362681910
6.4743829.28235.64357
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018143
(v1.0)
Rrbp1NM_024281,NM_13362681910
6.319645.12086.41651
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018143
(v1.0)
Rrbp1NM_024281,NM_13362681910
125.28127.06
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018143
(v1.0)
Rrbp1NM_024281,NM_13362681910
6.4781528.88137.03741
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018143
(v1.0)
Rrbp1NM_024281,NM_13362681910
15.420419.726218.4668
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018143
(v1.0)
Rrbp1NM_024281,NM_13362681910
167.766183.929
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018143
(v1.0)
Rrbp1NM_024281,NM_13362681910
21.6555.02839
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018143
(v1.0)
Rrbp1NM_024281,NM_13362681910
1.670661.19147
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018143
(v1.0)
450C0108H06-3Mm.13705Rrbp181910
U023433NAP094752-0015730465C04Rik;Rrbp1;TC870299,TC864064,TC864062,TC811753,TC811753Q99PL5U,F,23.01843.24862.95713.11472.70953.03632.9921
0018143
(v1.0)
5826H3009F11-3Mm.13705Rrbp181910
U023433NAP095094-0015730465C04Rik;Rrbp1;TC864062Q99PL5U,F,22.99483.23753.31273.48973.03353.29333.2356
0018143
(v1.0)
16221K0343F12-3Mm.13705Rrbp181910
U023433NAP014808-0015730465C04Rik;Rrbp1;TC864063Q99PL5U,F,22.84952.82522.96322.7963.24182.97513.0741
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018143
(v1.0)
1449221_a_atMm.13705Rrbp1NM_024281.2,NM_133626.281910
167.525124.75314.35149.35142.675
0018143
(v1.0)
1426123_a_atMm.13705Rrbp1NM_024281.2,NM_133626.281910
96.625086.363.777.875
0018143
(v1.0)
1452767_atMm.13705Rrbp1NM_024281.2,NM_133626.281910
00156.7750342.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018143
(v1.0)
A_51_P164686Rrbp1XM_62209781910
11P0.7710.235P
0018143
(v1.0)
A_51_P345663Rrbp1AK01996481910
11P2.060.0882P
0018143
(v1.0)
A_52_P472583Rrbp1XM_62209781910
11P0.6750.163P
Proteome N/A