DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018146
GeneRrm1
SynonymsRnrM1
Desc.ribonucleotide reductase M1
LocusNM_009103 chr7:109590209-109618285(+)
DB links


Entrez 20133
MGI 98180
Ensembl ENSMUSG00000030978
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018676
(v2.0)
Rrm1NM_00910320133
7.9908412.178313.762120.028341.170617.696461.295710.656733.269116.9942
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018146
(v1.0)
Rrm120133
MGA0.96132
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018676
(v2.0)
Rrm120133
540/385-0.0247427/3850.033184/3851.377237/3850.62840/385-1.1889236/385-1.2999
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018676
(v2.0)
Rrm120133
250/1680.0603179/168-0.024679/1682.4301220/1681.705425/168-0.669493/168-1.4378
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018676
(v2.0)
Rrm120133
60.758811951.06
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018676
(v2.0)
Rrm120133
16.73197322.92
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018146
(v1.0)
Rrm1NM_00910320133
12.65539.5382114.907828.572943.7279
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018146
(v1.0)
Rrm1NM_00910320133
35.681521.956846.646598.8345123.719
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018146
(v1.0)
Rrm1NM_00910320133
13.23232.9223310.4064
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018146
(v1.0)
Rrm1NM_00910320133
12.9169.442447.90508
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018146
(v1.0)
Rrm1NM_00910320133
41.177224.7433
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018146
(v1.0)
Rrm1NM_00910320133
13.242.882318.67003
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018146
(v1.0)
Rrm1NM_00910320133
13.802327.588222.931
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018146
(v1.0)
Rrm1NM_00910320133
77.999269.4568
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018146
(v1.0)
Rrm1NM_00910320133
5.257036.75404
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018146
(v1.0)
Rrm1NM_00910320133
4.469924.31374
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018146
(v1.0)
3276C0627D04-3U042850NAP035117-1Rrm1;TC798813,TC798812P07742U,F,22.67082.47742.40092.37022.94572.71582.8162
0018146
(v1.0)
6337H3023C08-3Rrm120133
U042850NAP007559-001Rrm1;TC798817,TC798812P07742U,F,22.89262.93242.82553.21772.61833.08593.0428
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018146
(v1.0)
1415878_atMm.197486Rrm1NM_009103.320133
213.95351.875201.175404.0251189.55
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018146
(v1.0)
A_51_P502082Rrm1NM_00910320133
11P1.0280.826P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018146
(v1.0)
Rrm120133
050050