DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018152
GeneRrp12
Synonyms
Desc.ribosomal RNA processing 12 homolog (S. cerevisiae)
LocusNM_199447 chr19:41937341-41970643(-)
DB links


Entrez 107094
MGI 2147437
Ensembl ENSMUSG00000035049
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018682
(v2.0)
Rrp12NM_199447107094
7.4366612.31115.5880250.147770.99677.3636110.35345.7526748.28918.01337
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018152
(v1.0)
Rrp12107094
MGA0.97266
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018682
(v2.0)
Rrp12107094
720/4510.1617481/451-0.0232513/4513.75141533/4513.089447/451-1.1875256/451-1.411
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018682
(v2.0)
Rrp12107094
366/1570.7047242/1570.5053467/1575.06941370/1574.434716/157-1.187182/157-1.5192
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018682
(v2.0)
Rrp12107094
75.108213456.05
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018682
(v2.0)
Rrp12107094
14.95757121.07
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018152
(v1.0)
Rrp12NM_199447107094
12.79813.8874437.313649.17767.42785
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018152
(v1.0)
Rrp12FR113461,NM_199447107094
383.65390.75511170.821670.71263.782
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018152
(v1.0)
Rrp12NM_199447107094
13.38162.719664.24128
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018152
(v1.0)
Rrp12NM_199447107094
13.06183.84844.26655
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018152
(v1.0)
Rrp12FR113461,NM_199447107094
125.965113.654
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018152
(v1.0)
Rrp12NM_199447107094
13.38942.682414.6794
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018152
(v1.0)
Rrp12NM_199447107094
34.546547.482933.5306
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018152
(v1.0)
Rrp12FR113461,NM_199447107094
505.791449.809
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018152
(v1.0)
Rrp12NM_199447107094
2.4851213.7381
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018152
(v1.0)
Rrp12NM_199447107094
0.1779940.0656
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018152
(v1.0)
19104L0247C06-3Mm.203883AA536972107094
U039041NAP005983-002AA536972;TC820384P10630U,F,22.80572.79483.64523.99963.29493.50183.2826
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018152
(v1.0)
1434239_atMm.276044Rrp12NM_199447.2107094
00105.6500
Agilent44K N/A
Proteome N/A