DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018156
GeneRrp7a
Synonyms
Desc.ribosomal RNA processing 7 homolog A (S. cerevisiae)
LocusNM_029101 chr15:82946277-82953231(-)
DB links


Entrez 74778
MGI 1922028
Ensembl ENSMUSG00000018040
Vega OTTMUSG00000035729
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Ribosome biogenesis in eukaryotes (mmu03008)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018686
(v2.0)
Rrp7aNM_02910174778
48.715322.265434.2109119.225109.10543.493165.260635.783386.538851.4219
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018156
(v1.0)
Rrp7a74778
Major ZGA0.98616
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018686
(v2.0)
Rrp7a74778
705/4700.072398/470-0.3552168/4702.0887400/4701.094514/470-2.924683/470-3.0778
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018686
(v2.0)
Rrp7a74778
289/1680.2683172/168-0.0818152/1683.3655368/1682.4453/168-3.369837/168-2.7329
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018686
(v2.0)
Rrp7a74778
94.016516955.63
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018686
(v2.0)
Rrp7a74778
23.63559524.88
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018156
(v1.0)
Rrp7aNM_02910174778
23.151523.780288.734475.443646.6329
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018156
(v1.0)
Rrp7aNM_02910174778
76.130429.8873106.95662.672462.5936
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018156
(v1.0)
Rrp7aNM_02910174778
24.20717.815725.9447
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018156
(v1.0)
Rrp7aNM_02910174778
23.628423.541426.5317
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018156
(v1.0)
Rrp7aNM_02910174778
14.362717.3446
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018156
(v1.0)
Rrp7aNM_02910174778
24.22117.571729.0991
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018156
(v1.0)
Rrp7aNM_02910174778
82.154272.843859.7676
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018156
(v1.0)
Rrp7aNM_02910174778
51.723653.3425
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018156
(v1.0)
Rrp7aNM_02910174778
9.263946.45994
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018156
(v1.0)
Rrp7aNM_02910174778
7.313322.84557
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018156
(v1.0)
17753L0013C06-3Mm.300561110014J01Rik74778
U036466NAP001435-0021110014J01Rik;TC841613Q9EPB5U,F,23.0243.1173.29183.51123.17643.18063.1394
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018156
(v1.0)
1448141_atMm.452636Rrp7aNM_029101.474778
58.0570.925130.175110.4591.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018156
(v1.0)
A_51_P1500141110014J01RikNM_02910174778
11P1.160.377P
0018156
(v1.0)
A_51_P3619061110014J01RikNM_02910174778
11P0.8320.324P
Proteome N/A