DBTMEE:0018197
| Gene | Rtn3 |
| Synonyms | |
| Description | reticulon 3 |
| Locus | NM_053076 UCSC: chr19:7500385-7557781(-) OLP: chr19:7500385-7557781(-)
NM_001271486 UCSC: chr19:7500385-7557781(-) OLP: chr19:7500385-7557781(-)
NM_001271487 UCSC: chr19:7500385-7557781(-) OLP: chr19:7500385-7557781(-)
NM_001003934 UCSC: chr19:7500385-7557781(-) OLP: chr19:7500385-7557781(-)
NM_001003933 UCSC: chr19:7500385-7557781(-) OLP: chr19:7500385-7557781(-)
|
| DB links |
Entrez 20168
MGI 1339970
Ensembl ENSMUSG00000024758
|
| Feature | protein-coding |
| GO_BP |
-
 4 Terms
|
| GO_MF |
-
1 Terms
|
| GO_CC |
-
4 Terms
|
| KEGG | |
| Ver2_FPKM |
see DBTMEE:2018729 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0018197
(v1.0) | Rtn3 | NM_001003933,NM_001003934,NM_053076 | 20168
| 25.3755 | 25.1176 | 6.68183 | 3.0366 | 32.7307 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0018197
(v1.0) | Rtn3 | NM_001003933,NM_001003934,NM_053076 | 20168
| 26.5324 | 31.4375 | 27.4039 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0018197
(v1.0) | Rtn3 | NM_001003933,NM_001003934,NM_053076 | 20168
| 25.8983 | 24.8654 | 18.6279 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0018197
(v1.0) | Rtn3 | NM_001003933,NM_001003934,NM_053076 | 20168
| 26.5478 | 31.0069 | 20.4304 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0018197
(v1.0) | Rtn3 | NM_001003933,NM_001003934,NM_053076 | 20168
| 6.18634 | 2.93196 | 3.09752 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0018197
(v1.0) | Rtn3 | NM_001003933,NM_001003934,NM_053076 | 20168
| 9.47415 | 11.87 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0018197
(v1.0) | Rtn3 | NM_001003933,NM_001003934,NM_053076 | 20168
| 6.19014 | 7.14543 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0018197
(v1.0) | 3250 | C0623G11-3 | Mm.21606 | Rtn3 | 20168
| U038683 | NAP002611-001 | Rtn3; | TC891556 | Q9ES97 | U,F,2 | 3.3472 | 3.3243 | 3.3013 | 3.2295 | 3.0646 | 3.1643 | 3.1607 |
0018197
(v1.0) | 19730 | L0296F01-3 | | Rtn3 | 20168
| U038683 | NAP002611-001 | Rtn3; | TC891556 | Q9ES97 | U,F,2 | 2.8074 | 2.998 | 2.979 | 2.8342 | 2.7621 | 2.7324 | 2.9916 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0018197
(v1.0) | 1418101_a_at | Mm.246990 | Rtn3 | NM_001003934.1,NM_001003933.1,NM_053076.2 | 20168
| 196.35 | 121.525 | 102.15 | 0 | 308.975 |
0018197
(v1.0) | 1425539_a_at | Mm.246990 | Rtn3 | NM_001003934.1,NM_001003933.1,NM_053076.2 | 20168
| 81.925 | 159.2 | 113.875 | 0 | 181.7 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0018197
(v1.0) | A_51_P494646 | Rtn3 | NM_001003934 | 20168
| 1 | 1 | P | 0.595 | 0.131 | P |
0018197
(v1.0) | A_52_P191975 | Rtn3 | NM_001003930 | 20168
| 1 | 1 | P | 0.507 | 0.114 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0018197
(v1.0) | Rtn3 | 20168
| 0 | 1 | 1 | 0 | 1 | 1 |
|
