DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018207
GeneRttn
Synonyms
Desc.rotatin
LocusNM_175542 chr18:89141182-89300406(+)
DB links


Entrez 246102
MGI 2179288
Ensembl ENSMUSG00000023066
Featureprotein-coding
GO(BP)
  •   2 Terms
      multicellular organismal development (GO:0007275)
      determination of left/right symmetry (GO:0007368)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018739
(v2.0)
RttnNM_175542,NR_105777246102
1.1432730.990242.955212.86089.400581.150358.3125830.6879.41450.959441
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018207
(v1.0)
Rttn246102
Minor ZGA0.9941
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018739
(v2.0)
Rttn246102
537/3470.1168450/3470.258197/3471.7274229/3470.7276182/3471.1175776/3470.5604
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018739
(v2.0)
Rttn246102
255/1460.2899184/1460.216295/1462.881203/1461.789273/1461.0368285/1460.3634
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018739
(v2.0)
Rttn246102
40.612710140.21
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018739
(v2.0)
Rttn246102
15.19327320.81
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018207
(v1.0)
RttnNM_175542246102
32.212829.73599.577156.53065.88454
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018207
(v1.0)
RttnFR192930,NM_175542246102
538.416455.606187.177127.79224.6351
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018207
(v1.0)
RttnNM_175542246102
33.68150.41810732.4426
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018207
(v1.0)
RttnNM_175542246102
32.876529.437422.7183
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018207
(v1.0)
RttnFR192930,NM_175542246102
602.19553.595
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018207
(v1.0)
RttnNM_175542246102
33.70110.4123824.9167
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018207
(v1.0)
RttnNM_175542246102
8.866956.305566.50925
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018207
(v1.0)
RttnFR192930,NM_175542246102
343.305179.991
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018207
(v1.0)
RttnNM_175542246102
6.230765.3921
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018207
(v1.0)
RttnNM_175542246102
5.3931518.4393
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018207
(v1.0)
1436588_atMm.772RttnNM_175542.3246102
404.85736.525267.3500
0018207
(v1.0)
1460110_atMm.772RttnNM_175542.3246102
000103.5158.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018207
(v1.0)
A_52_P137559RttnNM_175542246102
11P1.2560.263P
Proteome N/A