DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018222
GeneRuvbl1
SynonymsPontin52
Tip49a
Desc.RuvB-like protein 1
LocusNM_019685 chr6:88415417-88447560(+)
DB links


Entrez 56505
MGI 1928760
Ensembl ENSMUSG00000030079
Vega OTTMUSG00000023968
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018754
(v2.0)
Ruvbl1NM_01968556505
14.00894.724248.0763575.54673.206837.419435.93797.5419560.544148.62
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018222
(v1.0)
Ruvbl156505
Major ZGA0.99915
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018754
(v2.0)
Ruvbl156505
575/450-0.1588404/450-0.271183/4501.1412217/4500.277657/450-0.9113446/450-0.6105
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018754
(v2.0)
Ruvbl156505
195/159-0.2169142/159-0.277477/1592.4675192/1591.588211/159-1.707485/159-1.4864
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018754
(v2.0)
Ruvbl156505
53.51459158.81
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018754
(v2.0)
Ruvbl156505
17.07235332.21
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018222
(v1.0)
Ruvbl1NM_01968556505
4.9125.632756.207850.879625.7276
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018222
(v1.0)
Ruvbl1NM_01968556505
0.8092680.4206839.263537.258175.82725
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018222
(v1.0)
Ruvbl1NM_01968556505
5.135955.123186.14539
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018222
(v1.0)
Ruvbl1NM_01968556505
5.01325.576145.59718
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018222
(v1.0)
Ruvbl1NM_01968556505
0.4269430.337195
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018222
(v1.0)
Ruvbl1NM_01968556505
5.138935.053016.1388
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018222
(v1.0)
Ruvbl1NM_01968556505
52.039749.126341.9285
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018222
(v1.0)
Ruvbl1NM_01968556505
7.179555.90413
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018222
(v1.0)
Ruvbl1NM_01968556505
2.4588828.686
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018222
(v1.0)
Ruvbl1NM_01968556505
11.46043.68182
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018222
(v1.0)
1002C0172F06-3Mm.42195Ruvbl156505
U021842NAP099740-001TC814827,TC794035U,F,22.8493.14833.70563.97282.89653.49653.2525
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018222
(v1.0)
1416585_atMm.42195Ruvbl1NM_019685.256505
93.67583.375455.575338.05469.225
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018222
(v1.0)
A_51_P465772Ruvbl1NM_01968556505
11P0.7440.207P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018222
(v1.0)
Ruvbl156505
78211124