DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018237
GeneRyk
SynonymsERK-3
Vik
Desc.receptor-like tyrosine kinase
LocusNM_013649 chr9:102737250-102810637(+)
NM_001042607 chr9:102737250-102810637(+)
DB links


Entrez 20187
MGI 101766
Ensembl ENSMUSG00000032547
Vega OTTMUSG00000041987
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018769
(v2.0)
RykNM_001042607,NM_001284258,NM_01364920187
9.0420934.26649.301835.013514.603713.22245.993549.401315.918514.0289
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018237
(v1.0)
Ryk20187
Minor ZGA0.91262
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018769
(v2.0)
Ryk20187
621/492-0.1765395/492-0.43256/4920.4563187/492-0.064229/4920.94861452/4920.9605
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018769
(v2.0)
Ryk20187
315/2070.0925183/207-0.292448/2071.4401160/2070.9513103/2071.036644/2071.0345
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018769
(v2.0)
Ryk20187
82.120614357.43
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018769
(v2.0)
Ryk20187
21.57627827.66
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018237
(v1.0)
RykNM_001042607,NM_01364920187
35.610634.109726.03649.9905832.563
SOLiD_NMNR_Oo-4C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018237
(v1.0)
RykNM_001042607,NM_01364920187
37.23423.3068237.2145
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018237
(v1.0)
RykNM_001042607,NM_01364920187
36.344233.767336.3731
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018237
(v1.0)
RykNM_001042607,NM_01364920187
450.918555.379
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018237
(v1.0)
RykNM_001042607,NM_01364920187
37.25583.2615239.8928
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018237
(v1.0)
RykNM_001042607,NM_01364920187
24.10579.6463110.974
SOLiD_NMNR_Partheno4C_FPKM_gene_guided N/A
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018237
(v1.0)
RykNM_001042607,NM_01364920187
16.213418.9205
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018237
(v1.0)
RykNM_001042607,NM_01364920187
58.456563.8944
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018237
(v1.0)
6537H3026G12-3Mm.3860Ryk20187
U010938NAP009239-001Ryk;TC886950,TC886949Q01887U,F,23.94113.71953.00513.16433.00213.07523.3015
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018237
(v1.0)
1451789_a_atMm.335391RykNM_013649.3,NM_001042607.120187
0558.175312.050239
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018237
(v1.0)
A_51_P384148RykNM_01364920187
11P1.1160.47P
0018237
(v1.0)
A_52_P544017RykBC03227520187
11P0.9430.678P
Proteome N/A