DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018279
GeneSall4
SynonymsTex20
Desc.sal-like 4 (Drosophila)
LocusNM_201395 chr2:168573832-168592701(-)
NM_201396 chr2:168573832-168592701(-)
NM_175303 chr2:168573832-168592701(-)
DB links


Entrez 99377
MGI 2139360
Ensembl ENSMUSG00000027547
Vega OTTMUSG00000016116
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018811
(v2.0)
Sall4NM_175303,NM_201395,NM_20139699377
0140.84473.479651.879981.47322.92170.056603398.50171.482330.4232
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018279
(v1.0)
Sall499377
Maternal RNA0.97637
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018811
(v2.0)
Sall499377
849/4700.3396512/4700.007335/470-0.1423265/4700.5023507/4702.15722873/4702.0102
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018811
(v2.0)
Sall499377
464/1850.8104288/1850.5223/1850.563207/1851.4809263/1852.53871349/1852.2608
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018811
(v2.0)
Sall499377
105.132824742.56
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018811
(v2.0)
Sall499377
21.111713515.64
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018279
(v1.0)
Sall4NM_175303,NM_201395,NM_20139699377
146.51250.993738.601156.4890.036662
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018279
(v1.0)
Sall4NM_175303,NM_201395,NM_20139699377
247.4887.179860.866286.95260.0417774
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018279
(v1.0)
Sall4NM_175303,NM_201395,NM_20139699377
153.192055.6352
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018279
(v1.0)
Sall4NM_175303,NM_201395,NM_20139699377
149.53150.481673.0862
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018279
(v1.0)
Sall4NM_175303,NM_201395,NM_20139699377
88.5207131.25
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018279
(v1.0)
Sall4NM_175303,NM_201395,NM_20139699377
153.281080.1584
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018279
(v1.0)
Sall4NM_175303,NM_201395,NM_20139699377
35.738654.542449.61
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018279
(v1.0)
Sall4NM_175303,NM_201395,NM_20139699377
63.779558.1982
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018279
(v1.0)
Sall4NM_175303,NM_201395,NM_20139699377
83.889835.9085
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018279
(v1.0)
Sall4NM_175303,NM_201395,NM_20139699377
78.326192.2233
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018279
(v1.0)
15633K0216H02-3Mm.201009AW53610499377
U023697NAP002280-001Tex20;TC931906Q99MV4U,F,22.87392.84412.8072.79772.76652.80132.7691
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018279
(v1.0)
1424152_atMm.485872Sall4NM_175303.3,NM_201395.2,NM_201396.299377
1439.0251911.25819.3251069.3751003.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018279
(v1.0)
A_51_P145260Sall4NM_20139599377
11P0.7320.197P
0018279
(v1.0)
A_51_P349087Sall4AK01763399377
11P1.4080.183P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018279
(v1.0)
Sall499377
0500110