DBTMEE

DBTMEE
Database of Transcriptome in Mouse Early Embryos

DBTMEE:0018311

Gene

Sars

Synonyms

Strs

Description

seryl-aminoacyl-tRNA synthetase

Locus

NM_011319 UCSC: chr3:108227782-108248177(-) OLP: chr3:108227782-108248177(-)
NM_001204979 UCSC: chr3:108227782-108248177(-) OLP: chr3:108227782-108248177(-)

DB links

Entrez 20226
MGI 102809
Ensembl ENSMUSG00000068739
Vega OTTMUSG00000007261

Feature

protein-coding

GO_BP

3 Terms

GO_MF

5 Terms

GO_CC

2 Terms

KEGG

1 Terms

see DBTMEE:2018844 (v2.0)

SPR_Histone_Erkek_5KaroundTSS

N/A

SPR_Histone_Erkek_2KaroundTSS

N/A

SPR_Methy_Kobayashi_5KaroundTSS

N/A

SPR_Methy_Kobayashi_2KaroundTSS

N/A

SOLiD_OocyteTo4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	SPR_FPKM	Oo_FPKM	1C_FPKM	2C_FPKM	4C_FPKM	MEF_FPKM
0018311 (v1.0)	Sars	NM_011319	20226	45.1164	66.933	8.15425	13.6499	43.2428

SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	1C_FPKM
0018311 (v1.0)	Sars	NM_011319	20226	47.1734	33.6815	73.0253

SOLiD_Partheno1C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	1C_FPKM	p1C_FPKM
0018311 (v1.0)	Sars	NM_011319	20226	46.0459	66.2609	79.3776

SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	SPR_FPKM	p1C_FPKM
0018311 (v1.0)	Sars	NM_011319	20226	47.2008	33.2202	87.0587

SOLiD_Partheno4C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	2C_FPKM	4C_FPKM	p4C_FPKM
0018311 (v1.0)	Sars	NM_011319	20226	7.54956	13.1795	16.9392

Illumina_Oo_2C_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_FPKM	2C_FPKM
0018311 (v1.0)	Sars	NM_011319	20226	71.5263	3.13944

SOLiD_SC_Oo_REPLICA_FPKM_gene_guided

DBTMEE	Gene	RefSeq	Entrez	Oo_1_1	Oo_2_1
0018311 (v1.0)	Sars	NM_011319	20226	2.26569	0.974197

DBTMEE	Array_Feature_Number	Oligo_Parent_Clone	Unigene	Gene	Entrez	U_Cluster	NAP_Cluster	Gene_U/NAP	TIGR	SwissProt	EST	Oo	1C	2C	4C	8C	Morula	Blastocyst
0018311 (v1.0)	5882	H3011D07-3	Mm.28688	Sars1	20226	U024527	NAP093063-001	Sars1;	TC942475,TC874963,TC874961	P26638		2.804	3.1059	2.8203	2.758	2.7466	3.117	3.1122
0018311 (v1.0)	16000	K0317H06-3	Mm.28688	Sars1	20226							3.3641	3.4869	3.648	3.4269	3.4307	3.5534	3.4907

DBTMEE	Probe_ID	Unigene	Gene	RefSeq	Entrez	Oo	1C	2C	8C	Blastocyst
0018311 (v1.0)	1426257_a_at	Mm.28688	Sars	NM_011319.3,NM_001204979.1	20226	334.625	254.025	0	0	537.575

DBTMEE	Probe_ID	Gene	Acc	Entrez	Oo1_xFold	Oo1_pVal	Oo1_Flag	Oo2_xFold	Oo2_pVal	Oo2_Flag
0018311 (v1.0)	A_51_P372912	Sars1	NM_011319	20226	1	1	P	1.123	0.452	P

DBTMEE	Gene	Entrez	GV_seqCount	MII_seqCount	Zygote_seqCount	GV_specCount	MII_specCount	Zygote_specCount
0018311 (v1.0)	Sars	20226	7.33	6	8	14	7.33	13