DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018311
GeneSars
SynonymsStrs
Desc.seryl-aminoacyl-tRNA synthetase
LocusNM_011319 chr3:108227782-108248177(-)
NM_001204979 chr3:108227782-108248177(-)
DB links


Entrez 20226
MGI 102809
Ensembl ENSMUSG00000068739
Vega OTTMUSG00000007261
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Aminoacyl-tRNA biosynthesis (mmu00970)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018844
(v2.0)
SarsNM_001204979,NM_01131920226
45.891721.555648.06385.425039.6629268.184830.703453.112611.944964.6387
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018311
(v1.0)
Sars20226
Minor ZGA0.96955
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018844
(v2.0)
Sars20226
560/451-0.2394/451-0.310485/4511.172259/4510.528666/451-0.7064545/451-0.3254
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018844
(v2.0)
Sars20226
239/189-0.1732169/189-0.27682/1892.3241231/1891.60799/189-2.21466/189-2.0921
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018844
(v2.0)
Sars20226
63.405211157.12
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018844
(v2.0)
Sars20226
21.70156732.39
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018311
(v1.0)
SarsNM_01131920226
45.116466.9338.1542513.649943.2428
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018311
(v1.0)
SarsNM_01131920226
196.211210.40525.528361.6504163.096
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018311
(v1.0)
SarsNM_01131920226
47.173433.681573.0253
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018311
(v1.0)
SarsNM_01131920226
46.045966.260979.3776
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018311
(v1.0)
SarsNM_01131920226
310.827434.754
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018311
(v1.0)
SarsNM_01131920226
47.200833.220287.0587
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018311
(v1.0)
SarsNM_01131920226
7.5495613.179516.9392
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018311
(v1.0)
SarsNM_01131920226
57.323774.378
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018311
(v1.0)
SarsNM_01131920226
71.52633.13944
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018311
(v1.0)
SarsNM_01131920226
2.265690.974197
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018311
(v1.0)
5882H3011D07-3Mm.28688Sars120226
U024527NAP093063-001Sars1;TC942475,TC874963,TC874961P266382.8043.10592.82032.7582.74663.1173.1122
0018311
(v1.0)
16000K0317H06-3Mm.28688Sars120226
3.36413.48693.6483.42693.43073.55343.4907
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018311
(v1.0)
1426257_a_atMm.28688SarsNM_011319.3,NM_001204979.120226
334.625254.02500537.575
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018311
(v1.0)
A_51_P372912Sars1NM_01131920226
11P1.1230.452P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018311
(v1.0)
Sars20226
7.3368147.3313