DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018317
GeneSass6
Synonyms
Desc.spindle assembly 6 homolog (C. elegans)
LocusNM_028349 chr3:116297926-116333902(+)
DB links


Entrez 72776
MGI 1920026
Ensembl ENSMUSG00000027959
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018850
(v2.0)
Sass6NM_001289568,NM_001289571,NM_02834972776
1.682455.185077.5132110.979912.91073.043454.454375.2201612.17892.71725
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018317
(v1.0)
Sass672776
MGA0.942
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018850
(v2.0)
Sass672776
703/4250.2128496/4250.1064204/4252.5086489/4251.528132/425-1.6432237/425-1.4361
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018850
(v2.0)
Sass672776
347/1620.5832218/1620.3104195/1623.7717468/1622.842613/162-1.5113101/162-1.2684
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018850
(v2.0)
Sass672776
75.643916047.28
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018850
(v2.0)
Sass672776
17.12549817.47
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018317
(v1.0)
Sass6NM_02834972776
5.409475.185338.200179.041643.16264
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018317
(v1.0)
Sass6NM_02834972776
110.862132.271245.063308.06458.9164
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018317
(v1.0)
Sass6NM_02834972776
5.656090.6232175.65731
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018317
(v1.0)
Sass6NM_02834972776
5.520915.133273.86779
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018317
(v1.0)
Sass6NM_02834972776
90.278718.2454
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018317
(v1.0)
Sass6NM_02834972776
5.659380.6146814.24206
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018317
(v1.0)
Sass6NM_02834972776
7.592088.730068.4108
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018317
(v1.0)
Sass6NM_02834972776
269.71157.245
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018317
(v1.0)
Sass6NM_02834972776
1.704044.4863
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018317
(v1.0)
Sass6NM_02834972776
0.2851760.307663
NIA60mer N/A
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018317
(v1.0)
A_51_P2819972810453L12RikNM_02834972776
11P1.3110.269P
0018317
(v1.0)
A_52_P1181382810453L12RikNM_02834972776
11P0.5380.121P
Proteome N/A