DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018326
GeneSbf1
SynonymsMtmr5
Desc.SET binding factor 1
LocusNM_001170561 chr15:89118667-89145742(-)
NM_001081030 chr15:89118667-89145742(-)
DB links


Entrez 77980
MGI 1925230
Ensembl ENSMUSG00000036529
Vega OTTMUSG00000032616
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018859
(v2.0)
Sbf1NM_001081030,NM_00117056177980
13.375111.822812.00539.399199.5609311.249616.267418.55139.728639.91404
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018326
(v1.0)
Sbf177980
Minor ZGA0.97337
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018859
(v2.0)
Sbf177980
710/498-0.0011389/498-0.4715185/4982.1455330/4980.734760/498-0.9835463/498-0.7027
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018859
(v2.0)
Sbf177980
389/1960.474191/196-0.1527165/1963.2747275/1961.80679/196-2.2653120/196-1.2964
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018859
(v2.0)
Sbf177980
80.678113858.46
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018859
(v2.0)
Sbf177980
26.02928032.54
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018326
(v1.0)
Sbf1NM_001081030,NM_00117056177980
12.29548.36127.000266.6161311.293
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018326
(v1.0)
Sbf1NM_001081030,NM_00117056177980
680.511426.485355.831248.495452.882
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018326
(v1.0)
Sbf1NM_001081030,NM_00117056177980
12.85594.891739.12225
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018326
(v1.0)
Sbf1NM_001081030,NM_00117056177980
12.54878.2772513.7288
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018326
(v1.0)
Sbf1NM_001081030,NM_00117056177980
220.643315.528
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018326
(v1.0)
Sbf1NM_001081030,NM_00117056177980
12.86344.8247315.0573
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018326
(v1.0)
Sbf1NM_001081030,NM_00117056177980
6.481156.388146.75315
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018326
(v1.0)
Sbf1NM_001081030,NM_00117056177980
109.575140.19
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018326
(v1.0)
Sbf1NM_001081030,NM_00117056177980
2.473510.80565
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018326
(v1.0)
Sbf1NM_001081030,NM_00117056177980
00.0360889
NIA60mer N/A
MOE430 N/A
Agilent44K N/A
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018326
(v1.0)
Sbf177980
010010