DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018342
GeneScamp1
Synonyms
Desc.secretory carrier membrane protein 1
LocusNM_029153 chr13:94971388-95055236(-)
DB links


Entrez 107767
MGI 1349480
Ensembl ENSMUSG00000021687
Vega OTTMUSG00000033839
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018876
(v2.0)
Scamp1NM_029153107767
15.408331.307441.881149.497153.003211.100714.40235.817262.956416.6751
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018342
(v1.0)
Scamp1107767
Major ZGA0.92889
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018876
(v2.0)
Scamp1107767
695/4370.1562491/4370.051891/4371.3136254/4370.5459235/4371.15531440/4371.1192
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018876
(v2.0)
Scamp1107767
391/1600.7725232/1600.417679/1602.4956207/1601.6873146/1601.8985740/1601.6041
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018876
(v2.0)
Scamp1107767
56.698213641.69
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018876
(v2.0)
Scamp1107767
7.4085829.03
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018342
(v1.0)
Scamp1NM_029153107767
32.538128.839236.846336.796810.1346
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018342
(v1.0)
Scamp1NM_029153107767
40.040932.416841.910642.756411.8198
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018342
(v1.0)
Scamp1NM_029153107767
34.02155.6349631.4642
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018342
(v1.0)
Scamp1NM_029153107767
33.208428.549626.5226
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018342
(v1.0)
Scamp1NM_029153107767
32.924931.6224
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018342
(v1.0)
Scamp1NM_029153107767
34.04135.5577829.0891
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018342
(v1.0)
Scamp1NM_029153107767
34.113935.528843.5058
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018342
(v1.0)
Scamp1NM_029153107767
42.293952.2261
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018342
(v1.0)
Scamp1NM_029153107767
21.262526.1456
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018342
(v1.0)
Scamp1NM_029153107767
11.87539.11125
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018342
(v1.0)
8657H3069F07-3Scamp1107767
U035043NAP094772-001Scamp1;TC853064Q9D577U,F,23.19613.05872.47212.31722.49522.22532.4237
0018342
(v1.0)
20938L0820B04-3Scamp1107767
U035043NAP094772-001Scamp1;TC853064Q9D577U,F,22.78292.56652.62232.67672.89992.87612.8879
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018342
(v1.0)
1426775_s_atMm.201455Scamp1NM_029153.1107767
0095.95205.3176.75
0018342
(v1.0)
1453054_atMm.201455Scamp1NM_029153.1107767
1197.6751618.53205.625425.45191.125
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018342
(v1.0)
A_51_P217336Scamp1NM_029153107767
11P0.5910.138P
0018342
(v1.0)
A_51_P297346Scamp1NM_029153107767
11P0.7960.264P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018342
(v1.0)
Scamp1107767
331431