DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018344
GeneScamp3
SynonymsSc3
Desc.secretory carrier membrane protein 3
LocusNM_011886 chr3:88981407-88986692(+)
DB links


Entrez 24045
MGI 1346346
Ensembl ENSMUSG00000028049
Vega OTTMUSG00000029730
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018878
(v2.0)
Scamp3NM_01188624045
34.690640.439824.646619.197719.381936.66723.305229.944421.486539.074
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018344
(v1.0)
Scamp324045
Maternal RNA0.989
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018878
(v2.0)
Scamp324045
738/578-0.16407/578-0.620967/5780.4836167/578-0.457620/578-2.7352181/578-2.2649
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018878
(v2.0)
Scamp324045
290/242-0.2506164/242-0.67460/2421.5424142/2420.557413/242-2.078353/242-2.7556
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018878
(v2.0)
Scamp324045
114.233916569.23
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018878
(v2.0)
Scamp324045
43.45868749.95
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018344
(v1.0)
Scamp3NM_01188624045
42.053317.103114.284113.445516.6925
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018344
(v1.0)
Scamp3NM_001163432,NM_007712,NM_01188624045
222.848195.525100.51193.023890.7826
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018344
(v1.0)
Scamp3NM_01188624045
43.970612.686718.6598
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018344
(v1.0)
Scamp3NM_01188624045
42.919616.931322.1978
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018344
(v1.0)
Scamp3NM_01188624045
63.1716101.427
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018344
(v1.0)
Scamp3NM_01188624045
43.996112.512924.3458
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018344
(v1.0)
Scamp3NM_01188624045
13.224812.982214.8711
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018344
(v1.0)
Scamp3NM_001163432,NM_007712,NM_01188624045
135.609185.495
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018344
(v1.0)
Scamp3NM_01188624045
8.8650755.3885
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018344
(v1.0)
Scamp3NM_01188624045
8.9186418.1538
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018344
(v1.0)
777C0143A01-3Mm.3230Scamp324045
U003454NAP010081-001Scamp3;TC904320O356093.8913.90523.91944.36764.16374.28354.3021
0018344
(v1.0)
986C0170H12-3Mm.3230Scamp324045
U003454NAP010081-001Scamp3;TC904320O356093.89653.91023.91894.36974.17964.28474.2851
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018344
(v1.0)
1416294_atMm.288098~Mm.257052Clk2~Scamp3NM_007712.3,NM_001163432.1~NM_011886.212748
24045
186239.87500209.85
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018344
(v1.0)
A_51_P482639Scamp3NM_01188624045
11P1.210.308P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018344
(v1.0)
Scamp324045
232234