DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018348
GeneScap
Synonyms
Desc.SREBF chaperone
LocusNM_001103162 chr9:110235797-110287450(+)
NM_001001144 chr9:110235797-110287450(+)
DB links


Entrez 235623
MGI 2135958
Ensembl ENSMUSG00000032485
Vega OTTMUSG00000023555
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018882
(v2.0)
ScapNM_001001144,NM_001103162235623
23.974347.516840.644513.60769.125255.941734.9395466.48510.4858.71825
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018348
(v1.0)
Scap235623
Maternal RNA0.99499
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018882
(v2.0)
Scap235623
621/3470.326374/347-0.008180/3471.4525154/3470.158233/347-1.3107289/347-0.8598
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018882
(v2.0)
Scap235623
306/1250.774173/1250.350262/1252.4789126/1251.32548/125-1.7853114/125-0.7247
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018882
(v2.0)
Scap235623
65.494311755.98
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018882
(v2.0)
Scap235623
26.12597435.31
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018348
(v1.0)
ScapNM_001001144,NM_001103162235623
49.512528.288710.11316.34673.42016
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018348
(v1.0)
ScapNM_001001144,NM_001103162235623
501.529250.86394.059962.165240.53
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018348
(v1.0)
ScapNM_001001144,NM_001103162235623
51.76988.7857630.8636
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018348
(v1.0)
ScapNM_001001144,NM_001103162235623
50.532528.004749.3278
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018348
(v1.0)
ScapNM_001001144,NM_001103162235623
201.125365.142
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018348
(v1.0)
ScapNM_001001144,NM_001103162235623
51.79998.6654354.101
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018348
(v1.0)
ScapNM_001001144,NM_001103162235623
9.363176.127997.31012
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018348
(v1.0)
ScapNM_001001144,NM_001103162235623
52.751335.2887
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018348
(v1.0)
ScapNM_001001144,NM_001103162235623
68.86389.3322
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018348
(v1.0)
ScapNM_001001144,NM_001103162235623
74.641775.6645
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018348
(v1.0)
14050J0259C03-3Mm.291749530044G19235623
U011065NAP096918-001TC903802,TC903798,TC903797U,F,25.01894.97894.12934.54383.97944.12963.9144
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018348
(v1.0)
1433520_atMm.288741ScapNM_001001144.2,NM_001103162.1235623
542.35656.775237.02500
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018348
(v1.0)
A_52_P485971ScapNM_001001144235623
11P1.2450.272P
Proteome N/A