DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018443
GeneScyl1
Synonymsmdf
mfd
Ntkl
p105
Desc.SCY1-like 1 (S. cerevisiae)
LocusNM_023912 chr19:5758427-5771401(-)
DB links


Entrez 78891
MGI 1931787
Ensembl ENSMUSG00000024941
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018983
(v2.0)
Scyl1NM_02391278891
32.038815.669212.913814.689419.876215.614231.655322.752617.546816.5287
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018443
(v1.0)
Scyl178891
MGA0.92052
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018983
(v2.0)
Scyl178891
640/4400.0277392/440-0.2821140/4401.92316/4400.8535/440-1.5672256/440-1.3755
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018983
(v2.0)
Scyl178891
316/1550.5121148/155-0.1816127/1553.2162272/1552.12475/155-2.671653/155-2.1162
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018983
(v2.0)
Scyl178891
74.91912261.41
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018983
(v2.0)
Scyl178891
30.74427540.99
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018443
(v1.0)
Scyl1NM_02391278891
16.2898.973610.928813.744222.5559
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018443
(v1.0)
Scyl1NM_02391278891
129.49665.627786.229790.4813174.743
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018443
(v1.0)
Scyl1NM_02391278891
17.031711.71699.7904
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018443
(v1.0)
Scyl1NM_02391278891
16.62468.883516.8643
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018443
(v1.0)
Scyl1NM_02391278891
91.6976117.286
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018443
(v1.0)
Scyl1NM_02391278891
17.041611.556418.4961
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018443
(v1.0)
Scyl1NM_02391278891
10.118413.270612.2187
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018443
(v1.0)
Scyl1NM_02391278891
68.751866.5643
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018443
(v1.0)
Scyl1NM_02391278891
2.533521.07829
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018443
(v1.0)
Scyl1NM_02391278891
1.935241.66422
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018443
(v1.0)
9992H3089B02-3Ntkl78891
U019036NAP092972-001Ntkl;Scyl1;TC904896,TC863511,TC863510Q61810U,F,23.13913.46783.48853.94733.41893.66223.5047
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018443
(v1.0)
1451051_a_atMm.276063Scyl1NM_023912.278891
63.17551.12581.62571.157.525
0018443
(v1.0)
1436804_s_atMm.276063Scyl1NM_023912.278891
79.50137.475086.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018443
(v1.0)
A_51_P498023Scyl1NM_02391278891
11P1.4160.178P
Proteome N/A