DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018451
GeneSdcbp
SynonymsMDA-9
Sycl
syndecan interacting protein
syntenin
syntenin-1
Desc.syndecan binding protein
LocusNM_001098227 chr4:6292827-6323269(+)
NM_016807 chr4:6292827-6323269(+)
DB links


Entrez 53378
MGI 1337026
Ensembl ENSMUSG00000028249
Vega OTTMUSG00000004316
Featureprotein-coding
GO(BP)
  •   2 Terms
GO(MF)
GO(CC)
Ver2_FPKM N/A
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018451
(v1.0)
Sdcbp53378
1-Cell Transient0.98111
SPR_Histone_Erkek_+-5KfromTSS N/A
SPR_Histone_Erkek_+-2KfromTSS N/A
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018991
(v2.0)
Sdcbp53378
82.131211770.2
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018991
(v2.0)
Sdcbp53378
25.81965844.52
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018451
(v1.0)
SdcbpNM_001098227,NM_01680753378
13.995924.53949.528056.6615343.4063
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018451
(v1.0)
SdcbpNM_001098227,NM_01680753378
14.133923.31019.505616.1721746.6553
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided N/A
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018451
(v1.0)
SdcbpNM_001098227,NM_01680753378
14.284224.29317.2126
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018451
(v1.0)
SdcbpNM_001098227,NM_01680753378
37.5425.1987
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided N/A
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018451
(v1.0)
SdcbpNM_001098227,NM_01680753378
8.821496.431975.70248
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018451
(v1.0)
SdcbpNM_001098227,NM_01680753378
10.0779.33286
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018451
(v1.0)
SdcbpNM_001098227,NM_01680753378
20.38759.22397
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018451
(v1.0)
SdcbpNM_001098227,NM_01680753378
16.100220.7567
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018451
(v1.0)
4934G0115E02-3Mm.14744Sdcbp53378
U004047NAP120883-001Sdcbp;TC835443O08992U,F,23.83333.84533.25583.25232.75843.05413.5279
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018451
(v1.0)
1450941_atMm.247473SdcbpNM_001098227.1,NM_016807.253378
0000131.35
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018451
(v1.0)
A_51_P249494SdcbpNM_01680753378
11P0.6190.131P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018451
(v1.0)
Sdcbp53378
320350