DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018455
GeneSde2
SynonymsBC031781
Desc.SDE2 telomere maintenance homolog (S. pombe)
LocusNM_145943 chr1:182781282-182798245(+)
DB links


Entrez 208768
MGI 2384788
Ensembl ENSMUSG00000038806
Featureprotein-coding
GO(BP)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018995
(v2.0)
Sde2NM_145943208768
5.809223.9530110.64426.664930.62679.382837.096139.7217329.54088.56102
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018455
(v1.0)
BC031781208768
MGA0.91954
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018995
(v2.0)
Sde2208768
630/3530.322414/3530.1135466/3533.95611549/3533.455630/353-1.4685144/353-1.8819
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018995
(v2.0)
Sde2208768
375/1780.5596242/1780.3253397/1784.66681249/1784.12319/178-1.129474/178-1.8445
SPR_Methy_Kobayashi_+-5KfromTSS N/A
SPR_Methy_Kobayashi_+-2KfromTSS N/A
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018455
(v1.0)
BC031781NM_145943208768
4.108537.3949519.853321.25735.02584
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018455
(v1.0)
BC031781NM_145943208768
5.066358.1785622.83425.14175.93299
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018455
(v1.0)
BC031781NM_145943208768
4.295852.124498.06805
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018455
(v1.0)
BC031781NM_145943208768
4.193177.320697.20044
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018455
(v1.0)
BC031781NM_145943208768
8.30388.46959
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018455
(v1.0)
BC031781NM_145943208768
4.298342.095397.8972
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018455
(v1.0)
BC031781NM_145943208768
18.381120.524820.4304
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018455
(v1.0)
BC031781NM_145943208768
24.869824.5529
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018455
(v1.0)
BC031781NM_145943208768
2.162678.14202
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018455
(v1.0)
BC031781NM_145943208768
4.100284.35784
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018455
(v1.0)
732C0136A06-3Mm.56547MGC30618208768
U001198NAP007193-001MGC30618;TC875705U,F,23.19313.50153.94894.02073.33673.94233.7422
0018455
(v1.0)
6241H3021B07-5MGC30618208768
U001198NAP007193-001MGC30618;TC875705U,F,23.05833.12753.22673.2212.98193.11243.0028
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018455
(v1.0)
1436511_atMm.272625BC031781NM_145943.1208768
450.025625.71117.0251902.3251733.025
0018455
(v1.0)
1459829_x_atMm.272625BC031781NM_145943.1208768
247.8273.1281.6250308.325
0018455
(v1.0)
1447804_x_atMm.272625BC031781NM_145943.1208768
383.7394.175236.45451.925461.075
0018455
(v1.0)
1436151_x_atMm.272625BC031781NM_145943.1208768
0792.5250651.251199.35
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018455
(v1.0)
A_51_P373112BC031781NM_145943208768
11P1.2680.253P
0018455
(v1.0)
A_52_P535907BC031781NM_145943208768
11P0.9910.952P
Proteome N/A