DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018459
GeneSdha
SynonymsFP
SDH2
SDHF
Desc.succinate dehydrogenase complex, subunit A, flavoprotein (Fp)
LocusNM_023281 chr13:74459703-74487688(-)
DB links


Entrez 66945
MGI 1914195
Ensembl ENSMUSG00000021577
Vega OTTMUSG00000030724
Featureprotein-coding
GO(BP)
GO(MF)
  •   4 Terms
      succinate dehydrogenase (ubiquinone) activity (GO:0008177)
      oxidoreductase activity (GO:0016491)
      oxidoreductase activity, acting on the CH-CH group of donors (GO:0016627)
      flavin adenine dinucleotide binding (GO:0050660)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2018999
(v2.0)
SdhaNM_02328166945
78.396867.916897.57349.2721427.00277.994770.495688.849931.399972.0794
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018459
(v1.0)
Sdha66945
Minor ZGA0.93266
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018999
(v2.0)
Sdha66945
552/3130.3048403/3130.2477124/3132.222215/3130.784613/313-2.443951/313-3.1793
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2018999
(v2.0)
Sdha66945
251/1440.287167/1440.0969120/1443.2333204/1441.81586/144-2.345923/144-3.1637
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018999
(v2.0)
Sdha66945
42.70429246.42
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2018999
(v2.0)
Sdha66945
13.11035922.22
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018459
(v1.0)
SdhaNM_02328166945
70.613367.65156.9060818.757950.0052
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018459
(v1.0)
SdhaFR237400,FR344631,NM_02328166945
430.367403.4237.3125110.358269.26
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018459
(v1.0)
SdhaNM_02328166945
73.832728.670573.8093
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018459
(v1.0)
SdhaNM_02328166945
72.06866.972265.9792
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018459
(v1.0)
SdhaFR237400,FR344631,NM_02328166945
324.251343.967
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018459
(v1.0)
SdhaNM_02328166945
73.875628.277872.3637
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018459
(v1.0)
SdhaNM_02328166945
6.3939518.111521.7305
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018459
(v1.0)
SdhaFR237400,FR344631,NM_02328166945
104.767157.652
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018459
(v1.0)
SdhaNM_02328166945
35.13774.66278
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018459
(v1.0)
SdhaNM_02328166945
78.941461.0669
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018459
(v1.0)
12855H3153F01-3Mm.22149Sdha66945
U034969NAP001266-001Sdha;TC937307,TC798560Q9CT85U,F3.90223.84893.23563.07722.87643.1543.1454
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018459
(v1.0)
1426688_atMm.158231SdhaNM_023281.166945
671.8251423357.125465991.05
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018459
(v1.0)
A_51_P410823SdhaNM_02328166945
11P1.0130.938P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018459
(v1.0)
Sdha66945
101112163318