DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018464
GeneSdhd
Synonyms
Desc.succinate dehydrogenase complex, subunit D, integral membrane protein
LocusNM_025848 chr9:50404445-50411954(-)
DB links


Entrez 66925
MGI 1914175
Ensembl ENSMUSG00000000171
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019004
(v2.0)
SdhdNM_02584866925
60.4467121.50748.871115.462118.1456215.80876.945843.441120.0146249.678
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018464
(v1.0)
Sdhd66925
Maternal RNA0.97936
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019004
(v2.0)
Sdhd66925
547/445-0.2146419/445-0.2026175/4452.224480/4451.435411/445-3.168393/445-2.8378
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019004
(v2.0)
Sdhd66925
284/217-0.124200/217-0.2327170/2173.1789466/2172.42044/217-3.409345/217-2.8279
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019004
(v2.0)
Sdhd66925
70.837115545.7
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019004
(v2.0)
Sdhd66925
21.541910121.33
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018464
(v1.0)
SdhdNM_02584866925
126.2933.923611.520912.569854.3432
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018464
(v1.0)
SdhdNM_02584866925
155.74937.690113.001314.669563.3279
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018464
(v1.0)
SdhdNM_02584866925
132.04822.10637.0114
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018464
(v1.0)
SdhdNM_02584866925
128.89233.58332.1912
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018464
(v1.0)
SdhdNM_02584866925
37.961437.2802
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018464
(v1.0)
SdhdNM_02584866925
132.12521.803235.3063
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018464
(v1.0)
SdhdNM_02584866925
10.666612.136713.8795
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018464
(v1.0)
SdhdNM_02584866925
14.511116.6811
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018464
(v1.0)
SdhdNM_02584866925
52.719315.2627
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018464
(v1.0)
SdhdNM_02584866925
2.417780.499003
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018464
(v1.0)
6361H3023E11-33110001M13Rik66925
U030842NAP008227-0013110001M13Rik;TC836204Q9CXV1U,F2.79913.11332.88333.03242.47762.92263.2086
0018464
(v1.0)
19572L0281D05-3Mm.104063110001M13Rik66925
2.95422.92462.72342.77352.85412.85992.7823
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018464
(v1.0)
1428235_atMm.10406SdhdNM_025848.366925
975245.62500704.65
0018464
(v1.0)
1437489_x_atMm.10406SdhdNM_025848.366925
129.500084.475
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018464
(v1.0)
A_51_P260871SdhdNM_02584866925
11P0.3850.0703P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018464
(v1.0)
Sdhd66925
200200