DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018477
GeneSec11a
Synonyms18kDa
Sec11l1
sid2895
Spc18
Desc.SEC11 homolog A (S. cerevisiae)
LocusNM_019951 chr7:88060265-88092436(-)
DB links


Entrez 56529
MGI 1929464
Ensembl ENSMUSG00000025724
Vega OTTMUSG00000031331
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019017
(v2.0)
Sec11aNM_01995156529
58.829853.643552.896862.908587.467152.476336.713340.21579.527958.8499
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018477
(v1.0)
Sec11a56529
MGA0.98671
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019017
(v2.0)
Sec11a56529
606/3690.2024394/369-0.0216147/3692.2364346/3691.232862/369-0.5086447/369-0.3217
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019017
(v2.0)
Sec11a56529
273/1880.0252166/188-0.294144/1883.1361333/1882.141224/188-0.8845105/188-1.4267
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019017
(v2.0)
Sec11a56529
60.015111054.56
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019017
(v2.0)
Sec11a56529
16.26486425.41
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018477
(v1.0)
Sec11aNM_01995156529
55.753236.593746.853160.727826.2871
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018477
(v1.0)
Sec11aNM_01995156529
79.078460.27769.970679.855737.4142
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018477
(v1.0)
Sec11aNM_01995156529
58.295121.514739.9245
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018477
(v1.0)
Sec11aNM_01995156529
56.901836.226329.7281
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018477
(v1.0)
Sec11aNM_01995156529
236.446235.486
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018477
(v1.0)
Sec11aNM_01995156529
58.32921.2232.6048
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018477
(v1.0)
Sec11aNM_01995156529
43.378658.635154.9256
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018477
(v1.0)
Sec11aNM_01995156529
80.739570.8472
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018477
(v1.0)
Sec11aNM_01995156529
123.27135.5751
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018477
(v1.0)
Sec11aNM_01995156529
193.163132.83
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018477
(v1.0)
19556L0280D07-3Mm.43760Spc18-pending56529
U028772NAP010301-001Spc18;TC892523,TC892522Q9R0P6U,F,24.28154.2663.74124.1963.94944.28894.005
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018477
(v1.0)
1418223_atMm.43760Sec11aNM_019951.156529
1936.73019.5251418.1252179.7251671.85
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018477
(v1.0)
A_51_P366501Sec11l1NM_01995156529
11P1.0430.745P
0018477
(v1.0)
A_52_P242973Sec11l1NM_01995156529
11P0.6830.163P
Proteome N/A