DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018478
GeneSec11c
SynonymsSec11l3
Desc.SEC11 homolog C (S. cerevisiae)
LocusNM_025468 chr18:65960232-65977311(+)
DB links


Entrez 66286
MGI 1913536
Ensembl ENSMUSG00000024516
Vega OTTMUSG00000028234
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019018
(v2.0)
Sec11cNM_02546866286
67.146637.811311.7375.324518.610633.8356517.613511.339310.33854.16794
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018478
(v1.0)
Sec11c66286
Maternal RNA0.98986
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019018
(v2.0)
Sec11c66286
581/484-0.2487409/484-0.3583139/4841.7758414/4841.101955/484-1.0661479/484-0.6128
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019018
(v2.0)
Sec11c66286
258/188-0.0559168/188-0.2768122/1882.8988342/1882.179624/188-0.8845201/188-0.4997
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019018
(v2.0)
Sec11c66286
68.058314048.61
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019018
(v2.0)
Sec11c66286
15.03927520.05
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018478
(v1.0)
Sec11cNM_02546866286
39.28448.119423.956795.9695912.4668
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018478
(v1.0)
Sec11cNM_02546866286
74.12926.24124.952437.5676231.7856
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018478
(v1.0)
Sec11cNM_02546866286
41.075424.55628.85846
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018478
(v1.0)
Sec11cNM_02546866286
40.09378.037898.44804
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018478
(v1.0)
Sec11cNM_02546866286
9.555119.9553
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018478
(v1.0)
Sec11cNM_02546866286
41.099324.21999.26553
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018478
(v1.0)
Sec11cNM_02546866286
3.663375.763887.21278
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018478
(v1.0)
Sec11cNM_02546866286
7.485910.5669
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018478
(v1.0)
Sec11cNM_02546866286
10.53621.02431
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018478
(v1.0)
Sec11cNM_02546866286
2.397945.04426
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018478
(v1.0)
5998H3014E07-3Mm.278001810029G24Rik66286
U018831NAP010661-0011810029G24Rik;TC930776,TC854178Q9D8V72.57452.81662.43912.5652.46142.62382.7439
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018478
(v1.0)
1460698_a_atMm.27800Sec11cNM_025468.266286
919.925322.25153.5214.45421.7
Agilent44K N/A
Proteome N/A