DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018488
GeneSec22b
SynonymsERS-24
Sec22l1
Desc.SEC22 vesicle trafficking protein homolog B (S. cerevisiae)
LocusNM_011342 chr3:97705150-97726241(+)
DB links


Entrez 20333
MGI 1338759
Ensembl ENSMUSG00000027879
Vega OTTMUSG00000028867
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   2 Terms
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019028
(v2.0)
Sec22bNM_01134220333
32.78427.381347.61057.5361517.591237.082825.321651.637615.87837.9573
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018488
(v1.0)
Sec22b20333
Minor ZGA0.92474
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019028
(v2.0)
Sec22b20333
650/3860.2385489/3860.2245108/3861.7321286/3860.894466/386-0.4841392/386-0.5753
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019028
(v2.0)
Sec22b20333
268/1570.2572181/1570.088597/1572.8137273/1572.111811/157-1.689688/157-1.4191
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019028
(v2.0)
Sec22b20333
50.98819752.57
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019028
(v2.0)
Sec22b20333
13.77545823.75
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018488
(v1.0)
Sec22bNM_01134220333
28.458432.97615.6281112.243417.9305
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018488
(v1.0)
Sec22bNM_01134220333
39.076143.565610.330928.655930.308
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018488
(v1.0)
Sec22bNM_01134220333
29.755911.989535.9776
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018488
(v1.0)
Sec22bNM_01134220333
29.044732.644938.2149
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018488
(v1.0)
Sec22bNM_01134220333
130.36289.7795
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018488
(v1.0)
Sec22bNM_01134220333
29.773211.825241.9129
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018488
(v1.0)
Sec22bNM_01134220333
5.2107511.821510.9887
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018488
(v1.0)
Sec22bNM_01134220333
21.893718.3131
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018488
(v1.0)
Sec22bNM_01134220333
20.06721.88137
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018488
(v1.0)
Sec22bNM_01134220333
32.59318.2241
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018488
(v1.0)
1449063_atMm.2551Sec22bNM_011342.420333
410.025552.5104.75184.325417
0018488
(v1.0)
1415766_atMm.2551Sec22bNM_011342.420333
000081.175
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018488
(v1.0)
A_51_P253110Sec22l1NM_01134220333
11P0.5230.141P
0018488
(v1.0)
A_52_P418934Sec22l1NM_01134220333
11P0.6940.17P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018488
(v1.0)
Sec22b20333
484598