DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018490
GeneSec23a
SynonymsMsec23
Sec23r
Desc.SEC23A (S. cerevisiae)
LocusNM_009147 chr12:60059371-60113004(-)
DB links


Entrez 20334
MGI 1349635
Ensembl ENSMUSG00000020986
Vega OTTMUSG00000026430
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Protein processing in endoplasmic reticulum (mmu04141)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019030
(v2.0)
Sec23aNM_00914720334
16.625633.958123.512122.920322.571614.440723.047815.535122.580111.9507
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018490
(v1.0)
Sec23a20334
Maternal RNA0.98264
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019030
(v2.0)
Sec23a20334
663/3630.3554538/3630.4504939/3634.92632599/3634.161821/363-2.0031103/363-2.3996
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019030
(v2.0)
Sec23a20334
374/1580.7267264/1580.6212858/1585.9372204/1585.11137/158-2.283550/158-2.2253
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019030
(v2.0)
Sec23a20334
56.217616134.92
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019030
(v2.0)
Sec23a20334
11.21031139.92
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018490
(v1.0)
Sec23aNM_00914720334
35.295916.2517.053715.664116.2092
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018490
(v1.0)
Sec23aFR378290,NM_00914720334
674.108237.751231.553281.349181.493
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018490
(v1.0)
Sec23aNM_00914720334
36.90516.0801617.7291
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018490
(v1.0)
Sec23aNM_00914720334
36.023116.086811.492
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018490
(v1.0)
Sec23aFR378290,NM_00914720334
194.65457.2316
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018490
(v1.0)
Sec23aNM_00914720334
36.92665.9968812.604
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018490
(v1.0)
Sec23aNM_00914720334
15.789115.124315.5879
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018490
(v1.0)
Sec23aFR378290,NM_00914720334
150.466155.776
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018490
(v1.0)
Sec23aNM_00914720334
23.62596.40819
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018490
(v1.0)
Sec23aNM_00914720334
13.296718.0371
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018490
(v1.0)
15517K0200A10-3Mm.24426Sec23a20334
Sec23aTC9253993.86553.76663.54363.45073.51493.54713.5987
0018490
(v1.0)
16015K0320C12-3Mm.24426Sec23a20334
U033984NAP005111-001Sec23a;TC925399Q01405U,F3.91523.77712.85453.04413.10293.20013.4079
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018490
(v1.0)
1423347_atMm.485802Sec23aNM_009147.220334
378.275617.15287.075237.525371.05
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018490
(v1.0)
A_52_P72839Sec23aNM_00914720334
11P1.3340.216P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018490
(v1.0)
Sec23a20334
814423354