DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018502
GeneSec61g
Synonyms
Desc.SEC61, gamma subunit
LocusNM_001109972 chr11:16401641-16408487(-)
NM_001109971 chr11:16401641-16408487(-)
NM_011343 chr11:16401641-16408487(-)
DB links


Entrez 20335
MGI 1202066
Ensembl ENSMUSG00000078974
Vega OTTMUSG00000005181
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019042
(v2.0)
Sec61gNM_001109971,NM_001109972,NM_01134320335
199.47943.896516.81755.977516.472790.165446.341222.767313.8218114.469
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018502
(v1.0)
Sec61g20335
Maternal RNA0.95765
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019042
(v2.0)
Sec61g20335
606/3620.2299425/3620.115138/3622.1726294/3621.02676/362-0.1918442/362-0.3103
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019042
(v2.0)
Sec61g20335
290/1620.3254181/1620.0435133/1623.2231281/1622.108716/162-1.2312127/162-0.9423
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019042
(v2.0)
Sec61g20335
57.738812645.82
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019042
(v2.0)
Sec61g20335
15.40168019.25
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018502
(v1.0)
Sec61gNM_001109971,NM_001109972,NM_01134320335
45.646911.58224.4620211.423533.3469
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018502
(v1.0)
Sec61gNM_001109971,NM_001109972,NM_01134320335
11.54754.277690.2611540.1396731.68286
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018502
(v1.0)
Sec61gNM_001109971,NM_001109972,NM_01134320335
47.72872.951512.6364
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018502
(v1.0)
Sec61gNM_001109971,NM_001109972,NM_01134320335
46.587211.465916.996
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018502
(v1.0)
Sec61gNM_001109971,NM_001109972,NM_01134320335
1.842862.82271
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018502
(v1.0)
Sec61gNM_001109971,NM_001109972,NM_01134320335
47.755771.952418.6406
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018502
(v1.0)
Sec61gNM_001109971,NM_001109972,NM_01134320335
4.1311411.02999.55462
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018502
(v1.0)
Sec61gNM_001109971,NM_001109972,NM_01134320335
0.1381320.58474
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018502
(v1.0)
Sec61gNM_001109971,NM_001109972,NM_01134320335
16.243917.431
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018502
(v1.0)
Sec61gNM_001109971,NM_001109972,NM_01134320335
17.983818.4925
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018502
(v1.0)
11634H3120A08-3Mm.1164Sec61g20335
Sec61g2.95612.95563.09933.09812.84462.94632.9059
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018502
(v1.0)
1423090_x_atMm.390170~Mm.325350Gm10177~Sec61g~NM_001109971.1,NM_001109972.1,NM_011343.3100042561
20335
674.425270.400255.875
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018502
(v1.0)
A_51_P204390Sec61gNM_01134320335
11P0.7520.214P
Proteome N/A