DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018505
GeneSecisbp2
SynonymsSBP2
Desc.SECIS binding protein 2
LocusNM_029279 chr13:51747083-51779015(+)
DB links


Entrez 75420
MGI 1922670
Ensembl ENSMUSG00000035139
Vega OTTMUSG00000020967
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019045
(v2.0)
Secisbp2NM_02927975420
4.9309718.701724.4939.227238.289493.166257.2111824.71478.909413.79309
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018505
(v1.0)
Secisbp275420
Minor ZGA0.99688
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019045
(v2.0)
Secisbp275420
751/4480.232557/4480.1976732/4484.27282111/4483.560220/448-2.3706139/448-2.2753
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019045
(v2.0)
Secisbp275420
345/1990.2797283/1990.3901657/1995.2411573/1994.29689/199-2.286835/199-3.0528
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019045
(v2.0)
Secisbp275420
97.627715762.18
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019045
(v2.0)
Secisbp275420
34.51068938.78
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018505
(v1.0)
Secisbp2NM_02927975420
19.446217.0346.879915.759645.13036
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018505
(v1.0)
Secisbp2NM_02927975420
89.83248.964226.01520.240219.2132
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018505
(v1.0)
Secisbp2NM_02927975420
20.33281.8033118.5845
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018505
(v1.0)
Secisbp2NM_02927975420
19.846816.86318.3504
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018505
(v1.0)
Secisbp2NM_02927975420
48.784580.0067
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018505
(v1.0)
Secisbp2NM_02927975420
20.34461.7786120.1261
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018505
(v1.0)
Secisbp2NM_02927975420
6.369735.561166.15903
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018505
(v1.0)
Secisbp2NM_02927975420
55.106560.3386
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018505
(v1.0)
Secisbp2NM_02927975420
3.423521.40225
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018505
(v1.0)
Secisbp2NM_02927975420
14.291810.6029
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018505
(v1.0)
8153H3060F12-3Mm.466062810012K13Rik75420
U014844NAP094619-0012210413N07Rik;2810012K13Rik;TC941864Q9CSI8U,F3.90743.9733.3523.41493.23873.42653.3409
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018505
(v1.0)
1428496_atMm.275981Secisbp2NM_029279.175420
524.1629.37500553.625
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018505
(v1.0)
A_52_P558163Secisbp2AK03798875420
11P1.2510.275P
Proteome N/A