DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018560
GeneSept2
SynonymsNedd5
Desc.septin 2
LocusNM_001159718 chr1:95375570-95406309(+)
NM_001159717 chr1:95375570-95406309(+)
NM_010891 chr1:95375570-95406309(+)
NM_001159719 chr1:95375638-95406309(+)
DB links


Entrez 18000
MGI 97298
Ensembl ENSMUSG00000026276
Vega OTTMUSG00000021857
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019101
(v2.0)
Sept2NM_001159717,NM_001159718,NM_001159719,NM_01089118000
36.463422.239655.094757.170966.4557119.84797.538236.726661.6924107.178
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018560
(v1.0)
Sept218000
MGA0.99386
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019101
(v2.0)
Sept218000
587/3340.2999434/3340.2609322/3343.5013642/3342.265410/334-2.884478/334-2.6742
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019101
(v2.0)
Sept218000
312/1530.5124175/1530.0771318/1534.551627/1533.3454/153-2.916435/153-2.6757
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019101
(v2.0)
Sept218000
29.044912423.42
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019101
(v2.0)
Sept218000
11.802210611.13
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018560
(v1.0)
Sept2NM_001159717,NM_001159718,NM_001159719,NM_01089118000
23.107337.985942.524146.131768.7578
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018560
(v1.0)
Sept2NM_001159717,NM_001159718,NM_001159719,NM_01089118000
112.231189.863230.125196.665276.395
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018560
(v1.0)
Sept2NM_001159717,NM_001159718,NM_001159719,NM_01089118000
24.160813.335141.4434
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018560
(v1.0)
Sept2NM_001159717,NM_001159718,NM_001159719,NM_01089118000
23.583337.604427.2034
SOLiD_NMNR_Partheno1C_FPKM_gene_guided N/A
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018560
(v1.0)
Sept2NM_001159717,NM_001159718,NM_001159719,NM_01089118000
24.174813.152429.8357
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018560
(v1.0)
Sept2NM_001159717,NM_001159718,NM_001159719,NM_01089118000
39.370744.54242.555
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018560
(v1.0)
Sept2NM_001159717,NM_001159718,NM_001159719,NM_01089118000
125.406134.811
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018560
(v1.0)
Sept2NM_001159717,NM_001159718,NM_001159719,NM_01089118000
23.322347.1809
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018560
(v1.0)
Sept2NM_001159717,NM_001159718,NM_001159719,NM_01089118000
14.153512.5811
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018560
(v1.0)
4469C0936A02-3Mm.3362-Sep18000
U021616NAP123719-1P42208U,F,23.21323.31363.0642.97022.39522.82082.6953
0018560
(v1.0)
12799H3152E11-3Mm.3362-Sep18000
U000632NAP120726-0012-Sep;TC897523P42208U,F,23.72673.60613.48813.57353.52313.58623.7286
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018560
(v1.0)
1423472_atMm.428652Sept2NM_001159719.1,NM_010891.2,NM_001159717.1,NM_001159718.118000
149.55251.2324.75376.4346.125
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018560
(v1.0)
A_51_P214487Sep-02NM_01089118000
11P1.0560.683P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018560
(v1.0)
Sept218000
451571