DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018653
GeneSestd1
Synonyms
Desc.SEC14 and spectrin domains 1
LocusNM_175465 chr2:77018397-77118649(-)
DB links


Entrez 228071
MGI 1916262
Ensembl ENSMUSG00000042272
Vega OTTMUSG00000013223
Featureprotein-coding
GO(BP)
GO(MF)
  •   7 Terms
      phosphatidylinositol-4,5-bisphosphate binding (GO:0005546)
      phosphatidylinositol-5-phosphate binding (GO:0010314)
      phosphatidylinositol-3-phosphate binding (GO:0032266)
      phosphatidylinositol-3,4-bisphosphate binding (GO:0043325)
      phosphatidylinositol-4-phosphate binding (GO:0070273)
      phosphatidic acid binding (GO:0070300)
      phosphatidylinositol-3,5-bisphosphate binding (GO:0080025)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019194
(v2.0)
Sestd1NM_175465228071
6.4189817.57621.208510.67572.647981.926084.1980117.25772.965172.11429
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018653
(v1.0)
Sestd1228071
Maternal RNA0.9333
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019194
(v2.0)
Sestd1228071
639/3920.1917412/392-0.044357/3920.8004186/3920.2542154/3920.7041135/3920.9327
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019194
(v2.0)
Sestd1228071
288/1250.687170/1250.325150/1252.174130/1251.370287/1251.5042654/1251.7799
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019194
(v2.0)
Sestd1228071
78.686412264.5
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019194
(v2.0)
Sestd1228071
22.85716236.87
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018653
(v1.0)
Sestd1NM_175465228071
46.114338.295720.10884.607924.85949
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018653
(v1.0)
Sestd1FR131047,FR253935,NM_175465228071
388.579250.99483.756852.951228.5573
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018653
(v1.0)
Sestd1NM_175465228071
48.21674.3331341.7815
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018653
(v1.0)
Sestd1NM_175465228071
47.064337.911233.1765
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018653
(v1.0)
Sestd1FR131047,FR253935,NM_175465228071
254.872297.798
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018653
(v1.0)
Sestd1NM_175465228071
48.24474.2737836.3869
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018653
(v1.0)
Sestd1NM_175465228071
18.61764.449135.32093
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018653
(v1.0)
Sestd1FR131047,FR253935,NM_175465228071
57.813949.4047
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018653
(v1.0)
Sestd1NM_175465228071
25.82564.4356
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018653
(v1.0)
Sestd1NM_175465228071
30.540322.3535
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018653
(v1.0)
9438H3081C04-3Mm.231266LOC228071228071
U022785NAP095093-001TC794825U,F3.74963.68853.02793.03322.54522.64182.6446
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018653
(v1.0)
1429114_atMm.389296Sestd1NM_175465.5228071
637.251168.7765.7500
0018653
(v1.0)
1455549_atMm.389296Sestd1NM_175465.5228071
284.55411.175264.4143.35173.1
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018653
(v1.0)
A_51_P349166Sestd1NM_175465228071
11P1.4210.176P
0018653
(v1.0)
A_52_P408237Sestd1AK044401228071
11P1.160.378P
0018653
(v1.0)
A_52_P415821Sestd1AK005322228071
11P0.5960.121P
Proteome N/A