DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018668
GeneSetx
SynonymsAls4
Desc.senataxin
LocusNM_198033 chr2:28980512-29037991(+)
DB links


Entrez 269254
MGI 2443480
Ensembl ENSMUSG00000043535
Vega OTTMUSG00000011825
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019209
(v2.0)
SetxNM_198033269254
8.0680927.725843.1613114.78100.73420.615418.655331.592.97219.0486
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018668
(v1.0)
Setx269254
Major ZGA0.97636
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019209
(v2.0)
Setx269254
626/3730.2336406/3730.0061277/3733.1308632/3732.084644/373-1.0094425/373-0.4098
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019209
(v2.0)
Setx269254
343/1550.6298183/1550.1226262/1554.2551558/1553.158611/155-1.671683/155-1.4836
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019209
(v2.0)
Setx269254
47.550114033.96
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019209
(v2.0)
Setx269254
14.231510413.68
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018668
(v1.0)
SetxNM_198033269254
28.809229.802285.363969.727313.0524
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018668
(v1.0)
SetxNM_198033269254
425.635257.3261286.031070.41168.134
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018668
(v1.0)
SetxNM_198033269254
30.12272.9505832.5149
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018668
(v1.0)
SetxNM_198033269254
29.402729.50323.2964
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018668
(v1.0)
SetxNM_198033269254
377.034179.669
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018668
(v1.0)
SetxNM_198033269254
30.14022.9101725.5507
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018668
(v1.0)
SetxNM_198033269254
79.033767.324564.2613
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018668
(v1.0)
SetxNM_198033269254
508.285525.571
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018668
(v1.0)
SetxNM_198033269254
22.545258.9348
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018668
(v1.0)
SetxNM_198033269254
0.9432031.93663
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018668
(v1.0)
1433794_atMm.41867SetxNM_198033.2269254
2597.61532.33920.64445.1254762.075
0018668
(v1.0)
1458080_atMm.41867SetxNM_198033.2269254
077.57598.02500
0018668
(v1.0)
1440459_atMm.41867SetxNM_198033.2269254
00483.85152.625363.85
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018668
(v1.0)
A_51_P470448Als4NM_198033269254
11P0.4260.0752P
Proteome N/A