DBTMEE:0018676
| Gene | Sf3b1 |
| Synonyms | Prp10
SAP155
SF3b155
Targ4 |
| Description | splicing factor 3b, subunit 1 |
| Locus | NM_031179 UCSC: chr1:55042013-55084322(-) OLP: chr1:55042013-55084322(-)
|
| DB links |
Entrez 81898
MGI 1932339
Ensembl ENSMUSG00000025982
|
| Feature | protein-coding |
| GO_BP |
-
 3 Terms
RNA splicing, via transesterification reactions (GO:0000375)
mRNA splicing, via spliceosome (GO:0000398)
anterior/posterior pattern specification (GO:0009952)
|
| GO_MF |
-
2 Terms
|
| GO_CC |
-
4 Terms
|
| KEGG |
-
1 Terms
|
| Ver2_FPKM |
see DBTMEE:2019217 (v2.0)
|
| SPR_Histone_Erkek_5KaroundTSS |
N/A |
| SPR_Histone_Erkek_2KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_5KaroundTSS |
N/A |
| SPR_Methy_Kobayashi_2KaroundTSS |
N/A |
| SOLiD_OocyteTo4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | SPR_FPKM | Oo_FPKM | 1C_FPKM | 2C_FPKM | 4C_FPKM | MEF_FPKM |
|---|
0018676
(v1.0) | Sf3b1 | NM_031179 | 81898
| 92.7795 | 110.892 | 109.962 | 153.178 | 37.0202 | |
|
| SOLiD_Illumina_Oo_1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | 1C_FPKM |
|---|
0018676
(v1.0) | Sf3b1 | NM_031179 | 81898
| 97.0094 | 7.4846 | 120.986 |
|
| SOLiD_Partheno1C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 1C_FPKM | p1C_FPKM |
|---|
0018676
(v1.0) | Sf3b1 | NM_031179 | 81898
| 94.6908 | 109.779 | 75.2587 |
|
| SOLiD_Illumina_Oo_p1C_Sperm_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | SPR_FPKM | p1C_FPKM |
|---|
0018676
(v1.0) | Sf3b1 | NM_031179 | 81898
| 97.0658 | 7.38209 | 82.5412 |
|
| SOLiD_Partheno4C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | 2C_FPKM | 4C_FPKM | p4C_FPKM |
|---|
0018676
(v1.0) | Sf3b1 | NM_031179 | 81898
| 101.808 | 147.9 | 144.732 |
|
| Illumina_Oo_2C_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_FPKM | 2C_FPKM |
|---|
0018676
(v1.0) | Sf3b1 | NM_031179 | 81898
| 61.441 | 23.4655 |
|
| SOLiD_SC_Oo_REPLICA_FPKM_gene_guided |
| DBTMEE | Gene | RefSeq | Entrez | Oo_1_1 | Oo_2_1 |
|---|
0018676
(v1.0) | Sf3b1 | NM_031179 | 81898
| 62.72 | 65.4993 |
|
| NIA60mer |
| DBTMEE | Array_Feature_Number | Oligo_Parent_Clone | Unigene | Gene | Entrez | U_Cluster | NAP_Cluster | Gene_U/NAP | TIGR | SwissProt | EST | Oo | 1C | 2C | 4C | 8C | Morula | Blastocyst |
|---|
0018676
(v1.0) | 6162 | H3019C08-5 | | Sf3b1 | 81898
| U021335 | NAP080981-1 | Sf3b1; | TC881625,TC819374,TC816777 | Q99NB9 | U,F,2 | 3.6403 | 3.5223 | 3.6857 | 3.6772 | 3.0954 | 3.3696 | 3.1608 |
0018676
(v1.0) | 17246 | K0545F04-3 | Mm.28150 | Sf3b1 | 81898
| U021335 | NAP031522-1 | Sf3b1; | TC819377,TC819374 | Q99NB9 | U,F,2 | 2.028 | 2.0069 | 2.3194 | 1.8981 | 2.1127 | 2.0919 | 2.1386 |
0018676
(v1.0) | 19534 | L0278B02-3 | Mm.28150 | Sf3b1 | 81898
| U021335 | NAP092929-001 | Sf3b1; | TC819376,TC819374 | Q99NB9 | U,F,2 | 4.6056 | 4.5713 | 4.2595 | 4.4815 | 3.9305 | 4.3104 | 4.0799 |
0018676
(v1.0) | 21504 | L0857D03-3 | Mm.28150 | Sf3b1 | 81898
| U021335 | NAP092929-001 | Sf3b1; | TC881625,TC819374 | Q99NB9 | U,F,2 | 3.0918 | 2.9307 | 1.9837 | 2.3495 | 2.6479 | 2.507 | 2.3109 |
|
| MOE430 |
| DBTMEE | Probe_ID | Unigene | Gene | RefSeq | Entrez | Oo | 1C | 2C | 8C | Blastocyst |
|---|
0018676
(v1.0) | 1418561_at | Mm.279736 | Sf3b1 | NM_031179.2 | 81898
| 81.15 | 139.775 | 45.15 | 0 | 32.85 |
0018676
(v1.0) | 1440818_s_at | Mm.279736 | Sf3b1 | NM_031179.2 | 81898
| 1291.9 | 2354.7 | 1292.7 | 3575.5 | 1951.28 |
|
| Agilent44K |
| DBTMEE | Probe_ID | Gene | Acc | Entrez | Oo1_xFold | Oo1_pVal | Oo1_Flag | Oo2_xFold | Oo2_pVal | Oo2_Flag |
|---|
0018676
(v1.0) | A_52_P625808 | Sf3b1 | NM_031179 | 81898
| 1 | 1 | P | 1.559 | 0.152 | P |
|
| Proteome |
| DBTMEE | Gene | Entrez | GV_seqCount | MII_seqCount | Zygote_seqCount | GV_specCount | MII_specCount | Zygote_specCount |
|---|
0018676
(v1.0) | Sf3b1 | 81898
| 3 | 11 | 0 | 3 | 16 | 0 |
|
