DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018677
GeneSf3b2
Synonyms145kDa
SAP145
SF3b1
SF3b145
SF3b150
Desc.splicing factor 3b, subunit 2
LocusNM_030109 chr19:5273921-5295455(-)
DB links


Entrez 319322
MGI 2441856
Ensembl ENSMUSG00000024853
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019218
(v2.0)
Sf3b2NM_030109319322
57.827444.126850.107928.437739.785991.810860.449550.033933.181496.3553
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018677
(v1.0)
Sf3b2319322
Maternal RNA0.82884
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019218
(v2.0)
Sf3b2319322
664/4570.0261423/457-0.2272106/4571.4687317/4570.8002174/4570.65991025/4570.565
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019218
(v2.0)
Sf3b2319322
263/1830.0103152/183-0.381693/1832.5473214/1831.544122/183-0.9668132/183-1.0621
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019218
(v2.0)
Sf3b2319322
60.665715638.89
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019218
(v2.0)
Sf3b2319322
23.57579624.56
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018677
(v1.0)
Sf3b2NM_030109319322
45.878734.856321.150627.482242.9029
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018677
(v1.0)
Sf3b2NM_030109319322
280.614172.604133.529197.805189.862
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018677
(v1.0)
Sf3b2NM_030109319322
47.970321.148138.029
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018677
(v1.0)
Sf3b2NM_030109319322
46.823834.506337.2352
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018677
(v1.0)
Sf3b2NM_030109319322
481.092528.703
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018677
(v1.0)
Sf3b2NM_030109319322
47.998220.858440.8383
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018677
(v1.0)
Sf3b2NM_030109319322
19.582126.535223.0128
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018677
(v1.0)
Sf3b2NM_030109319322
413.479418.413
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018677
(v1.0)
Sf3b2NM_030109319322
66.42447.82419
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018677
(v1.0)
Sf3b2NM_030109319322
41.250221.8009
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018677
(v1.0)
1456352_a_atMm.196532Sf3b2NM_030109.2319322
96.2140.75110.375161.9171.925
0018677
(v1.0)
1433461_atMm.196532Sf3b2NM_030109.2319322
164.1229.675134.65306.1301.2
0018677
(v1.0)
1456040_atMm.196532Sf3b2NM_030109.2319322
126.725168.575111.125165.625151.6
0018677
(v1.0)
1438637_x_atMm.196532Sf3b2NM_030109.2319322
349.775377.1294.5505.575621.65
0018677
(v1.0)
1459836_x_atMm.196532Sf3b2NM_030109.2319322
00087.2750
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018677
(v1.0)
A_51_P280158Sf3b2NM_030109319322
11P1.0680.631P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018677
(v1.0)
Sf3b2319322
010010