DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018686
GeneSfpq
SynonymsD4Ertd314e
PSF
REP1
Desc.splicing factor proline/glutamine rich (polypyrimidine tract binding protein associated)
LocusNM_023603 chr4:126698545-126708480(+)
NR_045010 chr4:126698545-126714258(+)
DB links


Entrez 71514
MGI 1918764
Ensembl ENSMUSG00000028820
Vega OTTMUSG00000009316
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019227
(v2.0)
SfpqNM_023603,NR_04501071514
38.105121.805511.625921.716241.640159.214931.651210.908535.093259.8048
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018686
(v1.0)
Sfpq71514
MGA0.95269
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019227
(v2.0)
Sfpq71514
658/4290.1041463/429-0.0062240/4292.7289739/4292.109420/429-2.3087204/429-1.6644
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019227
(v2.0)
Sfpq71514
372/2020.3665219/2020.0004219/2023.6401594/2022.8727/202-2.6299102/202-1.571
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019227
(v2.0)
Sfpq71514
50.584514335.37
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019227
(v2.0)
Sfpq71514
14.45328816.42
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018686
(v1.0)
SfpqNM_02360371514
16.52126.5023914.156425.519518.2256
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018686
(v1.0)
SfpqNM_02360371514
226.03476.9656152.095315.586166.59
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018686
(v1.0)
SfpqNM_02360371514
17.274411.19117.09425
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018686
(v1.0)
SfpqNM_02360371514
16.86156.43715.84687
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018686
(v1.0)
SfpqNM_02360371514
62.346337.48
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018686
(v1.0)
SfpqNM_02360371514
17.284411.03786.41265
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018686
(v1.0)
SfpqNM_02360371514
13.106624.640121.9978
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018686
(v1.0)
SfpqNM_02360371514
116.98788.0344
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018686
(v1.0)
SfpqNM_02360371514
66.830233.667
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018686
(v1.0)
SfpqNM_02360371514
23.868134.4631
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018686
(v1.0)
3175C0612G07-3Mm.43213Sfpq71514
U004835NAP033985-1Sfpq;TC874248Q9ERW2U,F,22.80042.9342.7383.04593.03493.33063.3289
0018686
(v1.0)
18519L0211B03-3Sfpq71514
U004835NAP097804-001Sfpq;TC874249,TC874247Q9ERW2U,F,23.89943.76783.24423.743.78844.00473.8418
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018686
(v1.0)
1423795_atMm.482296Sfpq71514
238.825297.925118.275421.45308.375
0018686
(v1.0)
1438458_a_atMm.482296Sfpq71514
178.65198.7117.95149.02589.575
0018686
(v1.0)
1436898_atMm.482296Sfpq71514
00101.975235.65193.725
0018686
(v1.0)
1439058_atMm.482296Sfpq71514
383.475366.775339.125360.9397.6
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018686
(v1.0)
A_52_P292528SfpqNM_02360371514
11P0.4990.091P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018686
(v1.0)
Sfpq71514
781995