DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018737
GeneSh2d3c
SynonymsCas/HEF1-associated signal transducer
Chat
Nsp3
SH2-containing Eph receptor-binding protein 1
Shep1
Desc.SH2 domain containing 3C
LocusNM_013781 chr2:32576575-32610527(+)
NR_045535 chr2:32576575-32610527(+)
NM_001252547 chr2:32583209-32610527(+)
DB links


Entrez 27387
MGI 1351631
Ensembl ENSMUSG00000059013
Vega OTTMUSG00000012530
Featureprotein-coding
GO(BP)
  •   3 Terms
      signal transduction (GO:0007165)
      transmembrane receptor protein tyrosine kinase signaling pathway (GO:0007169)
      small GTPase mediated signal transduction (GO:0007264)
GO(MF)
  •   2 Terms
      transmembrane receptor protein tyrosine kinase adaptor activity (GO:0005068)
      guanyl-nucleotide exchange factor activity (GO:0005085)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019277
(v2.0)
Sh2d3cNM_001252547,NM_013781,NR_04553527387
9.986621.42923.173119.83685.88623.014690.39427835.11468.827581.95514
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018737
(v1.0)
Sh2d3c27387
Maternal RNA0.98085
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019277
(v2.0)
Sh2d3c27387
608/534-0.3249292/534-0.9844112/5341.3281332/5340.643257/534-1.1561559/534-0.5321
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019277
(v2.0)
Sh2d3c27387
297/247-0.2458139/247-0.940299/2472.2274306/2471.630428/247-1.0567306/247-0.289
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019277
(v2.0)
Sh2d3c27387
112.089412688.96
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019277
(v2.0)
Sh2d3c27387
49.62035590.22
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018737
(v1.0)
Sh2d3cNM_01378127387
17.963912.88811.88353.327240.262291
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018737
(v1.0)
Sh2d3cNM_01378127387
66.660734.743447.069512.40371.57679
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018737
(v1.0)
Sh2d3cNM_01378127387
18.78293.2254314.061
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018737
(v1.0)
Sh2d3cNM_01378127387
18.33412.758521.4521
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018737
(v1.0)
Sh2d3cNM_01378127387
47.8573108.362
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018737
(v1.0)
Sh2d3cNM_01378127387
18.79383.1812523.5279
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018737
(v1.0)
Sh2d3cNM_01378127387
11.00233.212585.02671
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018737
(v1.0)
Sh2d3cNM_01378127387
16.523821.9165
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018737
(v1.0)
Sh2d3cNM_01378127387
4.1542114.3313
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018737
(v1.0)
Sh2d3cNM_01378127387
24.165110.3622
NIA60mer N/A
MOE430 N/A
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018737
(v1.0)
A_51_P464761Sh2d3cNM_01378127387
11P4.4150.0428P
Proteome N/A