DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018744
GeneSh3bgrl2
Synonyms
Desc.SH3 domain binding glutamic acid-rich protein like 2
LocusNM_172507 chr9:83441945-83493898(+)
DB links


Entrez 212531
MGI 1915350
Ensembl ENSMUSG00000032261
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019284
(v2.0)
Sh3bgrl2NM_172507212531
7.7736221.464314.635611.17544.742788.070663.9044317.34444.539937.84948
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018744
(v1.0)
Sh3bgrl2212531
Maternal RNA0.99503
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019284
(v2.0)
Sh3bgrl2212531
751/5020.0682521/502-0.0625144/5021.775356/5020.8323309/5021.35051862/5021.29
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019284
(v2.0)
Sh3bgrl2212531
363/1780.5129228/1780.2397138/1783.1491319/1782.1572129/1781.5711736/1781.4434
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019284
(v2.0)
Sh3bgrl2212531
74.704613057.47
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019284
(v2.0)
Sh3bgrl2212531
23.64697730.71
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018744
(v1.0)
Sh3bgrl2NM_172507212531
22.309810.1178.318483.297682.77581
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018744
(v1.0)
Sh3bgrl2FR177066,FR330589,FR355157,FR359069,NM_172507212531
40.18217.488814.5224.777455.67873
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018744
(v1.0)
Sh3bgrl2NM_172507212531
23.3272.8428911.0378
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018744
(v1.0)
Sh3bgrl2NM_172507212531
22.769410.015412.8106
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018744
(v1.0)
Sh3bgrl2FR177066,FR330589,FR355157,FR359069,NM_172507212531
14.130920.3731
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018744
(v1.0)
Sh3bgrl2NM_172507212531
23.34052.8039514.0503
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018744
(v1.0)
Sh3bgrl2NM_172507212531
7.701623.184043.14636
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018744
(v1.0)
Sh3bgrl2FR177066,FR330589,FR355157,FR359069,NM_172507212531
4.065034.83209
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018744
(v1.0)
Sh3bgrl2NM_172507212531
11.78013.76001
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018744
(v1.0)
Sh3bgrl2NM_172507212531
7.366155.37345
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018744
(v1.0)
5630H3004B11-3Mm.100125A930014C21Rik212531
U010813NAP001163-001TC9359593.93993.85833.13823.09443.41233.26273.7328
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018744
(v1.0)
1434109_atMm.485873Sh3bgrl2NM_172507.5212531
106.5204.8756946.05319.075
0018744
(v1.0)
1434211_atMm.485873Sh3bgrl2NM_172507.5212531
126.8161.17500483.7
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018744
(v1.0)
A_52_P316933Sh3bgrl2NM_172507212531
11P1.2230.292P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018744
(v1.0)
Sh3bgrl2212531
001001