DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018761
GeneSh3rf1
SynonymsPosh
Sh3md2
Desc.SH3 domain containing ring finger 1
LocusNM_021506 chr8:63702968-63874869(+)
DB links


Entrez 59009
MGI 1913066
Ensembl ENSMUSG00000031642
Featureprotein-coding
GO(BP)
  •   5 Terms
      induction of apoptosis (GO:0006917)
      negative regulation of apoptotic process (GO:0043066)
      negative regulation of cysteine-type endopeptidase activity involved in apoptotic process (GO:0043154)
      regulation of JNK cascade (GO:0046328)
      negative regulation of extrinsic apoptotic signaling pathway (GO:2001237)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019301
(v2.0)
Sh3rf1NM_02150659009
6.6313343.505168.475930.417510.10833.362192.7888691.216411.08672.29927
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018761
(v1.0)
Sh3rf159009
Minor ZGA0.94638
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019301
(v2.0)
Sh3rf159009
878/4080.5916585/4080.4028146/4082.086413/4081.3435339/4081.78011569/4081.3417
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019301
(v2.0)
Sh3rf159009
493/1641.0705309/1640.794135/1643.228363/1642.4596213/1642.40551011/1642.0181
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019301
(v2.0)
Sh3rf159009
77.216718741.29
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019301
(v2.0)
Sh3rf159009
12.057211210.77
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018761
(v1.0)
Sh3rf1NM_02150659009
45.232847.38122.62647.008621.96455
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018761
(v1.0)
Sh3rf1NM_02150659009
133.823143.7667.858522.94155.69443
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018761
(v1.0)
Sh3rf1NM_02150659009
47.2952.4251551.6937
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018761
(v1.0)
Sh3rf1NM_02150659009
46.164646.905267.5347
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018761
(v1.0)
Sh3rf1NM_02150659009
122.222201.726
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018761
(v1.0)
Sh3rf1NM_02150659009
47.32252.3919374.0697
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018761
(v1.0)
Sh3rf1NM_02150659009
20.94856.76717.69483
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018761
(v1.0)
Sh3rf1NM_02150659009
23.000628.6378
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018761
(v1.0)
Sh3rf1NM_02150659009
35.16937.78996
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018761
(v1.0)
Sh3rf1NM_02150659009
4.794899.26678
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018761
(v1.0)
1768C0251D04-3Mm.27949Posh-pending59009
U009370NAP005073-002Posh;TC859864O70254U,F,22.81232.75782.51782.52212.58412.50842.6923
0018761
(v1.0)
15525K0201C06-3Mm.27949Posh-pending59009
U009370NAP039959-1Posh;O70254U,F,23.30833.25363.60373.50543.34753.54543.3128
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018761
(v1.0)
1455149_atMm.27949Sh3rf1NM_021506.259009
192.775409.475178.9062.375
0018761
(v1.0)
1442402_atMm.27949Sh3rf1NM_021506.259009
418.2304.225321.7305.125343.975
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018761
(v1.0)
A_51_P394754Sh3md2NM_02150659009
11P0.3040.0904P
0018761
(v1.0)
A_52_P1170840Sh3md2AK00863459009
11P0.6490.147P
0018761
(v1.0)
A_52_P299846Sh3md2NM_19867859009
11P0.540.103P
Proteome N/A