DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018794
GeneShoc2
SynonymsSur-8
Desc.soc-2 (suppressor of clear) homolog (C. elegans)
LocusNM_001168505 chr19:54018796-54107768(+)
NM_019658 chr19:54019366-54107768(+)
DB links


Entrez 56392
MGI 1927197
Ensembl ENSMUSG00000024976
Featureprotein-coding
GO(BP)
  •   1 Terms
      positive regulation of Ras protein signal transduction (GO:0046579)
GO(MF)
  •   1 Terms
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019334
(v2.0)
Shoc2NM_001168505,NM_01965856392
10.481462.94438.601612.571412.97317.674423.246124.921416.222816.0715
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018794
(v1.0)
Shoc256392
Maternal RNA0.95487
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019334
(v2.0)
Shoc256392
662/3490.4098445/3490.2338185/3492.6438373/3491.420720/349-2.0141142/349-1.8855
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019334
(v2.0)
Shoc256392
334/1450.6872182/1450.2103181/1453.813353/1452.59425/145-2.57869/145-1.6493
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019334
(v2.0)
Shoc256392
56.691612744.64
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019334
(v2.0)
Shoc256392
12.4327815.94
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018794
(v1.0)
Shoc2NM_001168505,NM_01965856392
65.407126.65229.355758.9778616.4258
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018794
(v1.0)
Shoc2NM_001168505,NM_01965856392
346.97865.83629.07852.557273.9771
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018794
(v1.0)
Shoc2NM_001168505,NM_01965856392
68.38913.8334829.0781
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018794
(v1.0)
Shoc2NM_001168505,NM_01965856392
66.754626.384518.4399
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018794
(v1.0)
Shoc2NM_001168505,NM_01965856392
74.290141.4553
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018794
(v1.0)
Shoc2NM_001168505,NM_01965856392
68.42893.7809820.2242
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018794
(v1.0)
Shoc2NM_001168505,NM_01965856392
8.661978.6684811.2221
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018794
(v1.0)
Shoc2NM_001168505,NM_01965856392
48.560963.9384
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018794
(v1.0)
Shoc2NM_001168505,NM_01965856392
113.21213.2649
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018794
(v1.0)
Shoc2NM_001168505,NM_01965856392
5.6068813.2245
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018794
(v1.0)
10144H3091F11-3Mm.33376Shoc256392
Shoc23.04872.87383.06212.87293.1182.93672.999
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018794
(v1.0)
1423129_atMm.228669Shoc2NM_019658.6,NM_001168505.156392
230.625357.9141.40118.45
0018794
(v1.0)
1425845_a_atMm.228669Shoc2NM_019658.6,NM_001168505.156392
137.075204189.6057.6
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018794
(v1.0)
A_51_P185941Shoc2NM_01965856392
11P0.5910.149P
0018794
(v1.0)
A_52_P621739Shoc2NM_01965856392
11P1.1050.522P
Proteome N/A