DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018797
GeneShprh
Synonyms
Desc.SNF2 histone linker PHD RING helicase
LocusNM_172937 chr10:10869228-10929413(+)
NM_001077707 chr10:10869228-10935071(+)
DB links


Entrez 268281
MGI 1917581
Ensembl ENSMUSG00000090112
Vega OTTMUSG00000034163
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019337
(v2.0)
ShprhNM_001077707,NM_001284354,NM_172937268281
1.8488.945978.057225.342816.845484.346116.154264.938497.039922.73161
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018797
(v1.0)
Shprh268281
Maternal RNA0.87586
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019337
(v2.0)
Shprh268281
699/3830.3543545/3830.3918104/3831.6891303/3830.988677/383-0.2536438/383-0.4045
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019337
(v2.0)
Shprh268281
370/1910.4392256/1910.3049103/1912.6352276/1911.848724/191-0.9069150/191-0.941
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019337
(v2.0)
Shprh268281
46.265110444.49
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019337
(v2.0)
Shprh268281
14.06127020.09
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018797
(v1.0)
ShprhNM_001077707,NM_172937268281
9.291615.577573.968964.692754.23301
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018797
(v1.0)
ShprhFR050545,FR075019,FR141723,FR175377,FR236571,FR370474,NM_001077707,NM_172937268281
65.48837.474121.937133.650732.5274
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018797
(v1.0)
ShprhNM_001077707,NM_172937268281
9.715230.6758316.08525
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018797
(v1.0)
ShprhNM_001077707,NM_172937268281
9.483025.521563.64511
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018797
(v1.0)
ShprhFR050545,FR075019,FR141723,FR175377,FR236571,FR370474,NM_001077707,NM_172937268281
102.63785.1075
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018797
(v1.0)
ShprhNM_001077707,NM_172937268281
9.720870.6665743.99784
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018797
(v1.0)
ShprhNM_001077707,NM_172937268281
3.674644.531044.82282
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018797
(v1.0)
ShprhFR050545,FR075019,FR141723,FR175377,FR236571,FR370474,NM_001077707,NM_172937268281
29.464734.4632
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018797
(v1.0)
ShprhNM_001077707,NM_172937268281
14.95764.05334
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018797
(v1.0)
ShprhNM_001077707,NM_172937268281
2.942594.78179
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018797
(v1.0)
1452261_atMm.133101ShprhNM_172937.3,NM_001077707.1268281
209337.8564.97578.52574.625
0018797
(v1.0)
1430582_atMm.133101ShprhNM_172937.3,NM_001077707.1268281
252.975216.225000
0018797
(v1.0)
1458594_atMm.133101ShprhNM_172937.3,NM_001077707.1268281
000178.80
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018797
(v1.0)
A_52_P228964ShprhAK086203268281
11P1.5770.142P
Proteome N/A