DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018826
GeneSin3b
Synonyms
Desc.transcriptional regulator, SIN3B (yeast)
LocusNM_001113248 chr8:75247187-75263810(+)
NM_009188 chr8:75247187-75282102(+)
DB links


Entrez 20467
MGI 107158
Ensembl ENSMUSG00000031622
Featureprotein-coding
GO(BP)
  •   6 Terms
      transcription, DNA-dependent (GO:0006351)
      regulation of transcription, DNA-dependent (GO:0006355)
      skeletal muscle tissue development (GO:0007519)
      negative regulation of cell cycle (GO:0045786)
      negative regulation of transcription, DNA-dependent (GO:0045892)
      cardiac muscle tissue development (GO:0048738)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019367
(v2.0)
Sin3bNM_001113248,NM_00918820467
226.1762.438789.828217.34436.9023138.7965.605490.355145.5446134.311
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018826
(v1.0)
Sin3b20467
Minor ZGA0.91944
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019367
(v2.0)
Sin3b20467
748/547-0.0612495/547-0.2598189/5472.0439488/5471.16361/547-1.0944334/547-1.3071
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019367
(v2.0)
Sin3b20467
360/1930.3848214/1930.0326174/1933.3719451/1932.540324/193-0.9216141/193-1.0443
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019367
(v2.0)
Sin3b20467
62.178115340.64
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019367
(v2.0)
Sin3b20467
16.464610515.68
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018826
(v1.0)
Sin3bNM_001113248,NM_00918820467
66.474663.349913.253326.290547.6837
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018826
(v1.0)
Sin3bNM_001113248,NM_00918820467
252.69251.49945.96470.3486100.622
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018826
(v1.0)
Sin3bNM_001113248,NM_00918820467
69.505384.771569.1161
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018826
(v1.0)
Sin3bNM_001113248,NM_00918820467
67.844162.713868.1258
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018826
(v1.0)
Sin3bNM_001113248,NM_00918820467
366.037458.473
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018826
(v1.0)
Sin3bNM_001113248,NM_00918820467
69.545783.610474.718
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018826
(v1.0)
Sin3bNM_001113248,NM_00918820467
12.270525.384632.231
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018826
(v1.0)
Sin3bNM_001113248,NM_00918820467
88.3288121.355
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018826
(v1.0)
Sin3bNM_001113248,NM_00918820467
37.34563.99928
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018826
(v1.0)
Sin3bNM_001113248,NM_00918820467
58.90751.1909
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018826
(v1.0)
11960H3129D02-3Mm.2137Sin3b20467
U009501NAP022924-001Sin3b;TC911828,TC794331,TC794330Q62141U,F4.26394.32613.84693.95744.38544.33314.6509
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018826
(v1.0)
1424355_a_atMm.2137Sin3bNM_009188.3,NM_001113248.120467
449.7415.200749.425
0018826
(v1.0)
1455039_a_atMm.2137Sin3bNM_009188.3,NM_001113248.120467
1149.85879.5430.775635.41927.1
0018826
(v1.0)
1452849_atMm.2137Sin3bNM_009188.3,NM_001113248.120467
529.825720.525000
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018826
(v1.0)
A_51_P159552Sin3bAK17300520467
11P1.0150.907P
0018826
(v1.0)
A_52_P57526Sin3bAK17300520467
11P0.9710.817P
Proteome N/A