DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018853
GeneSka2
SynonymsFam33a
Desc.spindle and kinetochore associated complex subunit 2
LocusNM_025377 chr11:86922763-86936476(+)
DB links


Entrez 66140
MGI 1913390
Ensembl ENSMUSG00000020492
Vega OTTMUSG00000001218
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019393
(v2.0)
Ska2NM_02537766140
2.349017.8838510.907344.48667.7919116.814524.52459.7065811.048817.905
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018853
(v1.0)
Fam33a66140
2-Cell Transient0.96511
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019393
(v2.0)
Ska266140
575/3260.305456/3260.367184/3262.731399/3261.615327/326-1.5019190/326-1.3712
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019393
(v2.0)
Ska266140
248/1520.1923184/1520.1584179/1523.7342387/1522.659610/152-1.769763/152-1.8452
SPR_Methy_Kobayashi_+-5KfromTSS N/A
SPR_Methy_Kobayashi_+-2KfromTSS N/A
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018853
(v1.0)
Fam33aNM_02537766140
8.191457.5511633.15455.4061817.2415
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018853
(v1.0)
Fam33aFR145730,NM_02537766140
9.616098.4979539.662510.936828.0004
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018853
(v1.0)
Fam33aNM_02537766140
8.564910.8590578.23848
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018853
(v1.0)
Fam33aNM_02537766140
8.36027.475347.18545
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018853
(v1.0)
Fam33aFR145730,NM_02537766140
7.921758.51252
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018853
(v1.0)
Fam33aNM_02537766140
8.569880.8472917.88076
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018853
(v1.0)
Fam33aNM_02537766140
30.69595.219887.68276
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018853
(v1.0)
Fam33aFR145730,NM_02537766140
21.768122.4335
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018853
(v1.0)
Fam33aNM_02537766140
7.9391341.917
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018853
(v1.0)
Fam33aNM_02537766140
0.7305050.706726
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018853
(v1.0)
7034H3040H05-3Mm.252331110001A07Rik66140
U013133NAP095395-0011110001A07Rik;TC809876Q9CR46U,F,22.80162.86943.16112.938132.92252.9866
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018853
(v1.0)
1423440_atMm.45008Fam33aNM_025377.366140
161.425171.825455.6250190.2
0018853
(v1.0)
1437480_atMm.45008Fam33aNM_025377.366140
99.125136.825106.87532.07585
Agilent44K N/A
Proteome N/A