DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018876
GeneSkp2
SynonymsFBXL1
Desc.S-phase kinase-associated protein 2 (p45)
LocusNM_145468 chr15:9041742-9070207(-)
NM_013787 chr15:9041742-9070207(-)
DB links


Entrez 27401
MGI 1351663
Ensembl ENSMUSG00000054115
Featureprotein-coding
GO(BP)
  •   8 Terms
      G1/S transition of mitotic cell cycle (GO:0000082)
      G2/M transition of mitotic cell cycle (GO:0000086)
      protein polyubiquitination (GO:0000209)
      ubiquitin-dependent protein catabolic process (GO:0006511)
      phosphorylation (GO:0016310)
      positive regulation of intracellular estrogen receptor signaling pathway (GO:0033148)
      positive regulation of smooth muscle cell proliferation (GO:0048661)
      regulation of cell cycle (GO:0051726)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019416
(v2.0)
Skp2NM_001285980,NM_01378727401
7.660954.005987.785919.757129.015315.20168.041355.5961627.978715.3173
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018876
(v1.0)
Skp227401
MGA0.98222
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019416
(v2.0)
Skp227401
671/3890.2731481/3890.1896125/3891.9304521/3891.746335/389-1.3913210/389-1.4821
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019416
(v2.0)
Skp227401
345/1560.629210/1560.3109110/1563.002345/1562.457418/156-1.017785/156-1.4591
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019416
(v2.0)
Skp227401
54.148812244.38
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019416
(v2.0)
Skp227401
19.14498522.52
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018876
(v1.0)
Skp2NM_013787,NM_14546827401
4.173395.4084314.748420.15955.57655
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018876
(v1.0)
Skp2NM_013787,NM_14546827401
6.6926410.146531.76440.93114.0746
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018876
(v1.0)
Skp2NM_013787,NM_14546827401
4.363662.807245.90072
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018876
(v1.0)
Skp2NM_013787,NM_14546827401
4.259375.354134.14643
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018876
(v1.0)
Skp2NM_013787,NM_14546827401
62.315446.1345
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018876
(v1.0)
Skp2NM_013787,NM_14546827401
4.36622.768794.54767
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018876
(v1.0)
Skp2NM_013787,NM_14546827401
13.654719.464819.3091
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018876
(v1.0)
Skp2NM_013787,NM_14546827401
40.487547.7319
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018876
(v1.0)
Skp2NM_013787,NM_14546827401
6.7718344.0199
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018876
(v1.0)
Skp2NM_013787,NM_14546827401
7.499568.80102
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018876
(v1.0)
1868C0265A10-3Mm.35584Skp227401
U042092NAP094550-001Skp2;Q9Z0Z3U,F,23.55853.41493.19753.69753.14993.22323.0272
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018876
(v1.0)
1460247_a_atMm.35584Skp2NM_145468.1,NM_013787.227401
182.975358.675937.651103.425238.1
0018876
(v1.0)
1436000_a_atMm.35584Skp2NM_145468.1,NM_013787.227401
95.675183.5564.45703.5122.925
0018876
(v1.0)
1437033_a_atMm.35584Skp2NM_145468.1,NM_013787.227401
81.6195.125438.85407.7126.3
0018876
(v1.0)
1425072_atMm.35584Skp2NM_145468.1,NM_013787.227401
00124.325191.5572.525
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018876
(v1.0)
A_51_P204454Skp2AF08321527401
11P0.6680.199P
0018876
(v1.0)
A_52_P144954Skp2NM_01378727401
11P0.8520.432P
Proteome N/A