DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018897
GeneSlc12a2
SynonymsmBSC2
Nkcc1
sodium/potassium/chloride cotransporters
sy-ns
Desc.solute carrier family 12, member 2
LocusNM_009194 chr18:58038332-58106475(+)
DB links


Entrez 20496
MGI 101924
Ensembl ENSMUSG00000024597
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019439
(v2.0)
Slc12a2NM_00919420496
0.96306211.2655.82294140.251279.035.5127720.80254.27026248.3625.40231
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018897
(v1.0)
Slc12a220496
MGA0.98922
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019439
(v2.0)
Slc12a220496
701/4060.2745442/4060.0064112/4061.7134234/4060.5336147/4060.5872936/4060.6045
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019439
(v2.0)
Slc12a220496
366/1500.7701198/1500.2826108/1503.0282216/1501.8449/1500.4333401/1500.8151
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019439
(v2.0)
Slc12a220496
51.980515832.9
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019439
(v2.0)
Slc12a220496
13.190411511.47
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018897
(v1.0)
Slc12a2NM_00919420496
11.70784.02791104.419193.74114.6795
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018897
(v1.0)
Slc12a2FR261828,NM_00919420496
14.70146.19681220.595435.21526.0108
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018897
(v1.0)
Slc12a2NM_00919420496
12.24160.3522024.39453
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018897
(v1.0)
Slc12a2NM_00919420496
11.9493.987463.16615
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018897
(v1.0)
Slc12a2FR261828,NM_00919420496
145.49282.2528
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018897
(v1.0)
Slc12a2NM_00919420496
12.24870.3473783.47253
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018897
(v1.0)
Slc12a2NM_00919420496
96.6759187.065171.681
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018897
(v1.0)
Slc12a2FR261828,NM_00919420496
382.306326.217
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018897
(v1.0)
Slc12a2NM_00919420496
7.490140.6088
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018897
(v1.0)
Slc12a2NM_00919420496
3.24832.75348
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018897
(v1.0)
9705H3085C04-3Mm.4168Slc12a220496
U018759NAP002728-002Slc12a2;TC935708P55012U,F,22.49632.47143.6533.98343.11962.86462.2855
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018897
(v1.0)
1417622_atMm.399997Slc12a2NM_009194.320496
215.975230.9416.5251574.825223.8
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018897
(v1.0)
A_51_P275527Slc12a2NM_00919420496
11P0.3880.0676P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018897
(v1.0)
Slc12a220496
300300