DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0018901
GeneSlc12a6
Synonymsgaxp
KCC3
Desc.solute carrier family 12, member 6
LocusNM_133649 chr2:112106471-112203320(+)
NM_133648 chr2:112124845-112203320(+)
DB links


Entrez 107723
MGI 2135960
Ensembl ENSMUSG00000027130
Ensembl ENSMUSG00000096764
Vega OTTMUSG00000015141
Vega OTTMUSG00000042283
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019443
(v2.0)
Slc12a6NM_133648,NM_133649107723
9.4229912.096211.32855.693244.34358.665895.674311.12393.835215.80776
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0018901
(v1.0)
Slc12a6107723
Maternal RNA0.96943
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019443
(v2.0)
Slc12a6107723
533/3240.2047425/3240.274515/324-0.791898/324-0.390420/324-1.908295/324-2.351
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019443
(v2.0)
Slc12a6107723
249/1390.3261194/1390.362514/1390.268380/1390.52639/139-1.781837/139-2.4613
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019443
(v2.0)
Slc12a6107723
36.814416023.01
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019443
(v2.0)
Slc12a6107723
15.61729017.35
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018901
(v1.0)
Slc12a6NM_133648,NM_133649107723
12.57487.833044.240453.008283.95967
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0018901
(v1.0)
Slc12a6FR372250,NM_133648,NM_133649107723
115.664115.78242.7234.276735.1571
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0018901
(v1.0)
Slc12a6NM_133648,NM_133649107723
13.14813.446028.54601
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0018901
(v1.0)
Slc12a6NM_133648,NM_133649107723
12.83397.754398.23203
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0018901
(v1.0)
Slc12a6FR372250,NM_133648,NM_133649107723
87.1165139.618
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0018901
(v1.0)
Slc12a6NM_133648,NM_133649107723
13.15583.398829.02861
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0018901
(v1.0)
Slc12a6NM_133648,NM_133649107723
3.925992.904612.67215
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0018901
(v1.0)
Slc12a6FR372250,NM_133648,NM_133649107723
30.987220.013
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0018901
(v1.0)
Slc12a6NM_133648,NM_133649107723
8.272521.95029
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0018901
(v1.0)
Slc12a6NM_133648,NM_133649107723
1.310224.5162
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0018901
(v1.0)
2966C0457G07-3Mm.21915Slc12a6107723
U002253NAP121061-001Slc12a6;Q924N4U,F,23.80033.71033.73473.67263.97223.81213.957
0018901
(v1.0)
18465L0208E03-3Mm.21915Slc12a6107723
U002253NAP110366-1Slc12a6;TC794118Q924N4U,F,23.45543.39663.5443.31053.11933.15023.1165
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0018901
(v1.0)
1436989_s_atMm.475370Slc12a6NM_133649.2,NM_133648.2107723
000043.925
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0018901
(v1.0)
A_51_P280437Slc12a6NM_133649107723
11P0.7910.28P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0018901
(v1.0)
Slc12a6107723
100100