DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019145
GeneSlc3a2
Synonyms4F2HC
Cd98
Ly-10
Ly-m10
Mdu1
Mgp-2hc
Desc.solute carrier family 3 (activators of dibasic and neutral amino acid transport), member 2
LocusNM_008577 chr19:8781372-8788387(-)
NM_001161413 chr19:8781372-8797859(-)
DB links


Entrez 17254
MGI 96955
Ensembl ENSMUSG00000010095
Featureprotein-coding
GO(BP)
GO(MF)
GO(CC)
KEGG
  •   1 Terms
      Protein digestion and absorption (mmu04974)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019696
(v2.0)
Slc3a2NM_001161413,NM_00857717254
79.855760.503126.772418.78624.3915100.95642.700427.552430.731979.0721
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019145
(v1.0)
Slc3a217254
Maternal RNA0.99442
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019696
(v2.0)
Slc3a217254
562/426-0.1128402/426-0.1994209/4262.5401847/4262.3167/426-3.691140/426-2.1926
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019696
(v2.0)
Slc3a217254
276/203-0.0693205/203-0.1015201/2033.5102813/2033.31714/203-3.314959/203-2.3526
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019696
(v2.0)
Slc3a217254
69.452914647.57
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019696
(v2.0)
Slc3a217254
21.68679423.07
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019145
(v1.0)
Slc3a2NM_001161413,NM_00857717254
62.899818.52913.975416.888630.5103
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019145
(v1.0)
Slc3a2NM_001161413,NM_00857717254
114.68150.551422.411124.905262.3337
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019145
(v1.0)
Slc3a2NM_001161413,NM_00857717254
65.767529.204220.2156
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019145
(v1.0)
Slc3a2NM_001161413,NM_00857717254
64.195618.34320.4164
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019145
(v1.0)
Slc3a2NM_001161413,NM_00857717254
133.827104.919
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019145
(v1.0)
Slc3a2NM_001161413,NM_00857717254
65.805728.804222.392
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019145
(v1.0)
Slc3a2NM_001161413,NM_00857717254
12.939116.306621.3497
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019145
(v1.0)
Slc3a2NM_001161413,NM_00857717254
61.068677.7356
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019145
(v1.0)
Slc3a2NM_001161413,NM_00857717254
27.745518.1193
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019145
(v1.0)
Slc3a2NM_001161413,NM_00857717254
109.358109.409
NIA60mer
DBTMEEArray Feature NumberOligo Parent CloneUnigeneGeneEntrezU_ClusterNAP_ClusterGene_U/NAPTIGRSwissProtESTOo1C2C4C8CMorulaBlastocyst
0019145
(v1.0)
6321H3023A07-3Slc3a217254
U038775NAP012561-001Slc3a2;TC841488P10852U,F,23.40633.18923.01833.02183.31433.143.2545
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019145
(v1.0)
1425364_a_atMm.4114Slc3a2NM_001161413.1,NM_008577.417254
506.41131.575480.2605.425577.65
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019145
(v1.0)
A_51_P472901Slc3a2NM_00857717254
11P1.4660.162P
Proteome
DBTMEEGeneEntrezGV_seqCountMII_seqCountZygote_seqCountGV_specCountMII_specCountZygote_specCount
0019145
(v1.0)
Slc3a217254
18138401912