DBTMEE
Database of Transcriptome in Mouse Early Embryos


Gene Search:

DBTMEE:0019191
GeneSlc5a6
Synonyms
Desc.solute carrier family 5 (sodium-dependent vitamin transporter), member 6
LocusNM_177870 chr5:31338409-31350452(-)
NM_001177622 chr5:31338409-31351297(-)
NM_001177621 chr5:31338409-31350935(-)
DB links


Entrez 330064
MGI 2660847
Ensembl ENSMUSG00000006641
Vega OTTMUSG00000022376
Featureprotein-coding
GO(BP)
GO(MF)
  •   3 Terms
GO(CC)
KEGG
  •   1 Terms
      Vitamin digestion and absorption (mmu04977)
Ver2_FPKM
DBTMEEGeneRefSeqEntrezSPR_FPKMOo_FPKM1C_FPKM2C_FPKM4C_FPKMESC_FPKMMEF_FPKMp1C_FPKMp4C_FPKMiPSC_FPKM
2019744
(v2.0)
Slc5a6NM_001177621,NM_001177622,NM_177870330064
3.04315.731626.64357243.315666.5335.112077.208495.85972514.5624.88596
SOLiD_Cluster_gene_guided
DBTMEEGeneEntrezClusterCorrelation
0019191
(v1.0)
Slc5a6330064
MGA0.99201
SPR_Histone_Erkek_+-5KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019744
(v2.0)
Slc5a6330064
695/4310.1761361/431-0.370995/4311.3944239/4310.478222/431-2.1841197/431-1.7211
SPR_Histone_Erkek_+-2KfromTSS
DBTMEEGeneEntrezH3.3_1
(ChIP/Input)
H3.3_1
(Enrich; log2)
H3.3_2
(ChIP/Input)
H3.3_2
(Enrich; log2)
H3K4me3_1
(ChIP/Input)
H3K4me3_1
(Enrich; log2)
H3K4me3_2
(ChIP/Input)
H3K4me3_2
(Enrich; log2)
H3K27me3_1
(ChIP/Input)
H3K27me3_1
(Enrich; log2)
H3K27me3_2
(ChIP/Input)
H3K27me3_2
(Enrich; log2)
2019744
(v2.0)
Slc5a6330064
365/1650.6295142/165-0.330589/1652.6242216/1651.704711/165-1.759551/165-2.2597
SPR_Methy_Kobayashi_+-5KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019744
(v2.0)
Slc5a6330064
54.785812444.18
SPR_Methy_Kobayashi_+-2KfromTSS
DBTMEEGeneEntrezTotal_mC_levelsNumber_of_mCsAveraged_Methylation_level(%)
2019744
(v2.0)
Slc5a6330064
15.35338318.5
SOLiD_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019191
(v1.0)
Slc5a6NM_001177621,NM_001177622,NM_177870330064
5.958824.60713181.127461.8015.18363
SOLiD_NMNR_Oo-4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKM2C_FPKM4C_FPKMMEF_FPKM
0019191
(v1.0)
Slc5a6NM_001177621,NM_001177622,NM_177870330064
13.554515.4032545.5741570.0824.3734
SOLiD_Illumina_Oo-1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKM1C_FPKM
0019191
(v1.0)
Slc5a6NM_001177621,NM_001177622,NM_177870330064
6.230491.112785.02648
SOLiD_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM1C_FPKMp1C_FPKM
0019191
(v1.0)
Slc5a6NM_001177621,NM_001177622,NM_177870330064
6.081584.560874.34381
SOLiD_NMNR_Partheno1C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez1C_FPKMp1C_FPKM
0019191
(v1.0)
Slc5a6NM_001177621,NM_001177622,NM_177870330064
11.0212.75779
SOLiD_Illumina_Oo-p1C-Sperm_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKMSPR_FPKMp1C_FPKM
0019191
(v1.0)
Slc5a6NM_001177621,NM_001177622,NM_177870330064
6.234111.097534.76415
SOLiD_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez2C_FPKM4C_FPKMp4C_FPKM
0019191
(v1.0)
Slc5a6NM_001177621,NM_001177622,NM_177870330064
167.696445.888355.497
SOLiD_NMNR_Partheno4C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrez4C_FPKMp4C_FPKM
0019191
(v1.0)
Slc5a6NM_001177621,NM_001177622,NM_177870330064
1731.041494.51
Illumina_Oo-2C_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_FPKM2C_FPKM
0019191
(v1.0)
Slc5a6NM_001177621,NM_001177622,NM_177870330064
3.8569467.7414
SOLiD_SC_Oo_REPLICA_FPKM_gene_guided
DBTMEEGeneRefSeqEntrezOo_1_1Oo_2_1
0019191
(v1.0)
Slc5a6NM_001177621,NM_001177622,NM_177870330064
0.3124770.143315
NIA60mer N/A
MOE430
DBTMEEProbe_IDUnigeneGeneRefSeqEntrezOo1C2C8CBlastocyst
0019191
(v1.0)
1435860_atMm.205463Slc5a6NM_001177621.1,NM_177870.5,NM_001177622.1330064
00623.5751323.9135.4
Agilent44K
DBTMEEProbe_IDGeneAcc.EntrezOo1_x-foldOo1_p-value (t-test)Oo1_FlagOo2_x-foldOo2_p-value (t-test)Oo2_Flag
0019191
(v1.0)
A_52_P55661Slc5a6NM_177870330064
11P0.4240.142P
Proteome N/A